Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M11
         (990 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    49   2e-04
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    35   3.7  
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    35   3.7  
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    34   4.9  

>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 25/32 (78%), Positives = 25/32 (78%)
 Frame = +2

Query: 260 LTDSLGXVVRXRGAVSXHXKGVIRLSTESGDN 355
           LTDSL  VVR R AVS H K VIRLSTESGDN
Sbjct: 23  LTDSLRSVVRLRRAVSAHSKAVIRLSTESGDN 54


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 34.7 bits (76), Expect = 3.7
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 261 SLTXWARSFGCGERYQXT 314
           SLT +ARSFGCGERY+ T
Sbjct: 41  SLTRYARSFGCGERYRLT 58


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 34.7 bits (76), Expect = 3.7
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = +1

Query: 445 P*XELXKXRXQVXGGETRQXYKDTXRF 525
           P   + K   QV GGETRQ YKDT RF
Sbjct: 22  PLTSITKIDAQVRGGETRQDYKDTRRF 48


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 34.3 bits (75), Expect = 4.9
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +1

Query: 445 P*XELXKXRXQVXGGETRQXYKDTXRF 525
           P   + K   Q+ GGETRQ YKDT RF
Sbjct: 58  PLTSITKSDAQISGGETRQDYKDTRRF 84


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,923,059
Number of Sequences: 1657284
Number of extensions: 4050594
Number of successful extensions: 20283
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19724
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 93081302556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)