Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M07
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 33 0.29
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.68
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 31 0.90
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 2.7
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 2.7
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 3.6
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 29 6.3
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 24 7.7
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 28 8.4
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 28 8.4
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 673 KXFPPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPP 792
K PPPPP + PPP PP S L PP
Sbjct: 674 KKVPPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPP 713
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 685 PPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPP 792
PPPP PPP PP L PPP
Sbjct: 694 PPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPP 729
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 655 PXXXPXKXFPPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPP 792
P P PPPPP PPP PP PPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +1
Query: 655 PXXXPXKXFPPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPPLQ 798
P P PPPPP PPP PP PP L+
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPPRLR 444
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 655 PXXXPXKXFPPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPP 789
P P PPPPP + PPP PP PP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 682 PPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPP 792
PPPPP + PPP PP + PPP
Sbjct: 554 PPPPPPGVDIPPPLPPSEDPKPPPPPPEPPEECPPPP 590
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +1
Query: 682 PPPPPXXXXXKKXXXXXKXXXPPPXPP---XFSKXLXPPP 792
PPPPP + PPP PP + L PPP
Sbjct: 194 PPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPP 233
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +1
Query: 682 PPPPPXXXXXKKXXXXXKXXXPPPXPP---XFSKXLXPPP 792
PPPPP + PPP PP + L PPP
Sbjct: 106 PPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPP 145
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 682 PPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPP 792
PPPPP PPP PP PPP
Sbjct: 280 PPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPP 316
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 667 PXKXFPPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPP 792
P PPPPP K PPP PP + PPP
Sbjct: 360 PTNNTPPPPPPTN--KPPPPPPPTNGPPPPPPPTNGPPPPPP 399
>SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 LGVCHADDLAQAAGQIFNNILPNLISNHVTGQQGNTAQNTFQQIG-TVVGGVVDYAKKKS 292
LGV D+L G+ N+ +L H Q G T+ + + +G + G VV+Y+ +S
Sbjct: 129 LGVLTYDELDNGQGRARLNLFRHL---HEI-QSGRTSSISHEILGFSCTGEVVNYSDGRS 184
Query: 293 YEDLLRQAQDSTTDDDL 343
ED+ Q+ T DL
Sbjct: 185 AEDVCEQSSKLITFIDL 201
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Frame = +1
Query: 682 PPPPPXXXXXK----KXXXXXKXXXPPPXPP-XFSKXLXPPPLQKXXFF 813
PPPPP + + + PPP PP + + PPP + F+
Sbjct: 26 PPPPPTRPFERNIHPRTEPRDRERPPPPPPPRFYDNDIPPPPPPRRGFY 74
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 655 PXXXPXKXFPPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPPL 795
P P FP PP PPP PP PPP+
Sbjct: 164 PRTQPPPIFPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPI 210
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = -2
Query: 529 SCRIVQQRSYGGPLHTFSG-TF-----NKFDCASSFLDIGVVLPL*IHLNVVEGIVYICI 368
SC V +R Y P+ T G TF + S +LD ++ + IHL G + +
Sbjct: 456 SCSYVYRRGYKAPIFTIPGRTFPVEILYTKEAESDYLDAALITVMQIHLTEPPGDILV-- 513
Query: 367 KHFLANSEEVIVGRRIL 317
FL EE+ IL
Sbjct: 514 --FLTGQEEIDTACEIL 528
>SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 482 CMERTTIRPLLHYSTTIPEM*STXVVTP 565
C+ TTI HY+T I EM S+ ++ P
Sbjct: 145 CVTVTTIHVSFHYTTFIEEMQSSWIINP 172
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 23.8 bits (49), Expect(2) = 7.7
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 745 PPPXPPXFSKXLXPPPL 795
PPP PP PPP+
Sbjct: 227 PPPPPPGAGDPAYPPPV 243
Score = 23.0 bits (47), Expect(2) = 7.7
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 634 PXFXXXXPXXXPXKXFPPPPP 696
P P P +PPPPP
Sbjct: 210 PPMGGPPPMGGPPGGYPPPPP 230
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 149 AAGQIFNNILPNLI--SNHVTGQQGNTAQNTFQQIGT-VVGGVVDYAKKKSYEDLLRQAQ 319
A+G+ F+ L + +N + G TAQ F ++GT +VG + + +ED + + +
Sbjct: 1056 ASGKFFSRALDDAADSANRIEG----TAQKEFAEVGTDIVGVQKQMVELQKFEDDMLKEE 1111
Query: 320 DSTTDDDLLRVSEE 361
DS DDL + +E
Sbjct: 1112 DSF--DDLQKKMDE 1123
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 682 PPPPPXXXXXKKXXXXXKXXXPPPXPPXFSKXLXPPP 792
PPPPP + PPP PP S PPP
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGS---APPP 966
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -1
Query: 794 RGGGXXXXEKXGGXGGGXXXXXXXKXFXXXXXXGGGGGKXFXGKXXG 654
RGGG GG GGG F GGGGG F G G
Sbjct: 83 RGGGFGGGGGFGGGGGGGFGGGGGGGF----GGGGGGGGGFGGGGGG 125
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,905,067
Number of Sequences: 59808
Number of extensions: 451757
Number of successful extensions: 1433
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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