Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M05
(985 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VN25 Cluster: CG9805-PA, isoform A; n=12; Endopterygo... 148 2e-34
UniRef50_Q14152 Cluster: Eukaryotic translation initiation facto... 103 7e-21
UniRef50_UPI0000E48E62 Cluster: PREDICTED: similar to Eukaryotic... 102 2e-20
UniRef50_A4S0R1 Cluster: Predicted protein; n=2; Ostreococcus|Re... 74 5e-12
UniRef50_P34339 Cluster: Probable eukaryotic translation initiat... 73 1e-11
UniRef50_Q9LD55 Cluster: Eukaryotic translation initiation facto... 72 3e-11
UniRef50_A1D4A7 Cluster: Eukaryotic translation initiation facto... 68 3e-10
UniRef50_O74760 Cluster: Probable eukaryotic translation initiat... 66 1e-09
UniRef50_Q75DT8 Cluster: ABL065Wp; n=1; Eremothecium gossypii|Re... 64 5e-09
UniRef50_Q6C161 Cluster: Similar to CA3499|CaRPG1 Candida albica... 62 2e-08
UniRef50_P38249 Cluster: Eukaryotic translation initiation facto... 60 1e-07
UniRef50_Q5CS35 Cluster: Putative eukaryotic translation initiat... 57 6e-07
UniRef50_Q5C2T9 Cluster: SJCHGC08842 protein; n=1; Schistosoma j... 57 6e-07
UniRef50_Q5KGK5 Cluster: Eukaryotic translation initiation facto... 57 8e-07
UniRef50_Q4UGH6 Cluster: Eukaryotic translation initiation facto... 56 2e-06
UniRef50_A3GI11 Cluster: Translation initiation factor 3, subuni... 54 6e-06
UniRef50_Q8I5S6 Cluster: Eukaryotic translation initiation facto... 53 1e-05
UniRef50_Q5DFN4 Cluster: SJCHGC03815 protein; n=1; Schistosoma j... 35 2.8
UniRef50_Q12830 Cluster: Nucleosome-remodeling factor subunit BP... 33 8.5
>UniRef50_Q9VN25 Cluster: CG9805-PA, isoform A; n=12;
Endopterygota|Rep: CG9805-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1140
Score = 148 bits (358), Expect = 2e-34
Identities = 81/161 (50%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
Frame = +2
Query: 206 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELC 385
MARY QRPENALKRANEF+++ KP RALDTLQEVFRN +W Y +SE+V++P+ F YL LC
Sbjct: 1 MARYTQRPENALKRANEFIEVGKPLRALDTLQEVFRNKRWNYAYSETVIEPLMFKYLYLC 60
Query: 386 VDLRKSHVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMX 565
V+L+KSH+A EGLFQYRN FQ VNV SL + E A +
Sbjct: 61 VELKKSHIAKEGLFQYRNMFQLVNVNSLENVIRGYLKMAEEHTEAAQAQSSAAVAVLELD 120
Query: 566 XI-TLXTPEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
+ + TPE IL C G DR PWVK LWE
Sbjct: 121 DLDNIATPESILMSAVC-GEDAQDR-SDRTILLPWVKFLWE 159
>UniRef50_Q14152 Cluster: Eukaryotic translation initiation factor 3
subunit 10; n=52; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 10 - Homo sapiens (Human)
Length = 1382
Score = 103 bits (247), Expect = 7e-21
Identities = 65/160 (40%), Positives = 82/160 (51%)
Frame = +2
Query: 206 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELC 385
M Y QRPENALKRANEF+++ K ALD L +V ++ K W + + +PI YLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 386 VDLRKSHVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMX 565
VDLRKSH+A EGL+QY+N Q VN+ SL + E A +
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMV-LDIED 117
Query: 566 XITLXTPEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
+ TPE +L G DR PWVK LWE
Sbjct: 118 LDNIQTPESVLLSA-VSGEDTQDRT-DRLLLTPWVKFLWE 155
>UniRef50_UPI0000E48E62 Cluster: PREDICTED: similar to Eukaryotic
translation initiation factor 3, subunit 10 (theta);
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Eukaryotic translation initiation factor 3,
subunit 10 (theta) - Strongylocentrotus purpuratus
Length = 1284
Score = 102 bits (244), Expect = 2e-20
Identities = 68/161 (42%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Frame = +2
Query: 206 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELC 385
M Y QRPENALKRANEF+D+ K ALD L +V ++ + W + + +PI YLELC
Sbjct: 1 MPTYFQRPENALKRANEFIDVGKKQPALDALYDVIKSKRHR-TW-QKIHEPIMEKYLELC 58
Query: 386 VDLRKSHVAXEGLFQYRNXFQSVNVGSL-GAGYKRLSPYGRGTXETAXVFIDPXXHRPLM 562
VDLRKSH+A EGL+QY+ Q VNV SL K L G T + H +
Sbjct: 59 VDLRKSHIAKEGLYQYKIICQQVNVKSLEDVVRKYLKLAGDQTEDARKASEAVVGHVDVD 118
Query: 563 XXITLXTPEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
L TPE +L G R PWVK LWE
Sbjct: 119 DLDNLTTPESLLLSA-VSGEDAQAR-SDRVVLIPWVKFLWE 157
>UniRef50_A4S0R1 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 872
Score = 74.1 bits (174), Expect = 5e-12
Identities = 50/154 (32%), Positives = 72/154 (46%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
RPENA+KRA E +++ + AL +L E+ + + W++ VL+ + F Y+ELCV+L+K
Sbjct: 10 RPENAIKRAEELINVGQKQAALLSLHEIVTSRR-NRQWTK-VLEEVMFKYVELCVELKKG 67
Query: 404 HVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMXXITLXT 583
+ +GL QYRN VNV SL KR ETA + T
Sbjct: 68 RLCKDGLMQYRNTCLLVNVQSLEEVVKRFLKLSTERAETAQAEFGATLDADVDLEAEF-T 126
Query: 584 PEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
PE +L + + PW K LWE
Sbjct: 127 PESLL--AKAYRLDHENEATEKETVTPWFKFLWE 158
>UniRef50_P34339 Cluster: Probable eukaryotic translation initiation
factor 3 subunit 10; n=2; Caenorhabditis|Rep: Probable
eukaryotic translation initiation factor 3 subunit 10 -
Caenorhabditis elegans
Length = 1076
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 215 YGQRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDL 394
Y Q+PE ALKRA E + + K + ALDTL + + + W+ +V + I ++ELCVDL
Sbjct: 5 YFQKPEAALKRAEELIQVGKESDALDTLHDTIKARRHK-QWT-TVHEQIMIKHMELCVDL 62
Query: 395 RKSHVAXEGLFQYRNXFQSVNVGSL 469
+K H+A + LFQY+ Q +NV SL
Sbjct: 63 KKQHLAKDALFQYKALTQQINVKSL 87
>UniRef50_Q9LD55 Cluster: Eukaryotic translation initiation factor 3
subunit 10; n=15; Eukaryota|Rep: Eukaryotic translation
initiation factor 3 subunit 10 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 987
Score = 71.7 bits (168), Expect = 3e-11
Identities = 51/160 (31%), Positives = 72/160 (45%)
Frame = +2
Query: 206 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELC 385
MA + +PENALKRA+E +++ + AL L ++ + ++ W + L+ I F YL+LC
Sbjct: 1 MANFA-KPENALKRADELINVGQKQDALQALHDLITSKRYRA-WQKP-LEKIMFKYLDLC 57
Query: 386 VDLRKSHVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMX 565
VDL++ A +GL QYR Q VNV SL K E A D +
Sbjct: 58 VDLKRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFLHLATDKAEQARSQADALEEALDVD 117
Query: 566 XITLXTPEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
+ L G DR + PW K LWE
Sbjct: 118 DLEADRKPEDLQLSIVSGEKGKDRSDRELVT-PWFKFLWE 156
>UniRef50_A1D4A7 Cluster: Eukaryotic translation initiation factor 3
subunit EifCa, putative; n=17; Pezizomycotina|Rep:
Eukaryotic translation initiation factor 3 subunit
EifCa, putative - Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain
ATCC 1020 / DSM 3700 / NRRL 181))
Length = 1067
Score = 68.1 bits (159), Expect = 3e-10
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
+PEN LKRA E + + + AL+ L E + + + S L+P+ ++ELCVDLRK
Sbjct: 8 KPENVLKRAQELIAVGQAPAALNVLHEHVTSKRTRSSPIAS-LEPVMLLFVELCVDLRKG 66
Query: 404 HVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFID--------PXXHRPL 559
A +GL+QY+N Q+ NVG++ K+ A D +
Sbjct: 67 KAAKDGLYQYKNIAQNTNVGTIEVVLKKFIELAEKKVTEAQAKADEIQSSLESAAPSSNV 126
Query: 560 MXXITLXTPEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
+ TPE IL G DR + PW+K LWE
Sbjct: 127 EDLEAIETPETIL-LATVSGEQSRDRTDRAVVT-PWLKFLWE 166
>UniRef50_O74760 Cluster: Probable eukaryotic translation initiation
factor 3 110 kDa subunit; n=1; Schizosaccharomyces
pombe|Rep: Probable eukaryotic translation initiation
factor 3 110 kDa subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 932
Score = 66.5 bits (155), Expect = 1e-09
Identities = 46/154 (29%), Positives = 70/154 (45%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
+PEN L+ A+E + LD+ + AL +L E K + N L+PI ++ELCV LRK
Sbjct: 7 KPENVLRLADELIALDQHSSALQSLHETIV-LKRSRNAQGFSLEPIMMRFIELCVHLRKG 65
Query: 404 HVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMXXITLXT 583
+A EGL+ Y+N Q+ +V ++ K + A D + T
Sbjct: 66 KIAKEGLYTYKNAVQNTSVTAIENVVKHFIELANKRVQEAQEKADKISVEYVDDLEATET 125
Query: 584 PEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
PE I+ G R + PW+K LW+
Sbjct: 126 PESIMMSL-VSGDLSKSRTDRALVT-PWLKFLWD 157
>UniRef50_Q75DT8 Cluster: ABL065Wp; n=1; Eremothecium gossypii|Rep:
ABL065Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 921
Score = 64.1 bits (149), Expect = 5e-09
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
RPENALKRA+E + + +P AL +L + + + + + ++PI F +LEL V+L++
Sbjct: 7 RPENALKRADELISVGEPQAALQSLLDYITSRRIRFA-DPAAIEPIVFKFLELGVELKRG 65
Query: 404 HVAXEGLFQYRNXFQSVNVG--SLGAGYKR 487
V +GL+QYR QS G S+GA +R
Sbjct: 66 KVIKDGLYQYRKHVQSSTEGLKSVGAVSRR 95
>UniRef50_Q6C161 Cluster: Similar to CA3499|CaRPG1 Candida albicans
CaRPG1; n=1; Yarrowia lipolytica|Rep: Similar to
CA3499|CaRPG1 Candida albicans CaRPG1 - Yarrowia
lipolytica (Candida lipolytica)
Length = 955
Score = 62.1 bits (144), Expect = 2e-08
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
RPE LKR +E + + + AL+ L E K A S + L+PI +++L VDLRK
Sbjct: 8 RPETVLKRTDELIAVGQQDAALELLHETVSARK-ARTTSVATLEPIVARFVQLSVDLRKG 66
Query: 404 HVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMXXITL-X 580
+ +GL QY+ QS NV ++ K+ A D +
Sbjct: 67 KIIKDGLHQYKKIVQSTNVNAIEPVIKQFLSLAEQRVTDAQAQADKIADEEEADDLEAEE 126
Query: 581 TPEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
TPE +L DR + PW+K LWE
Sbjct: 127 TPEDLL-LATVSSEDTKDRTDRRVVT-PWLKFLWE 159
>UniRef50_P38249 Cluster: Eukaryotic translation initiation factor 3
110 kDa subunit; n=5; Saccharomycetales|Rep: Eukaryotic
translation initiation factor 3 110 kDa subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 964
Score = 59.7 bits (138), Expect = 1e-07
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVF--RNXKWAYNWSESVLQPIXFXYLELCVDLR 397
RPENA+KRA+E + + + AL +L + R +WA + S ++P+ F +LE+ V+L+
Sbjct: 7 RPENAIKRADELISVGEKQAALQSLHDFITARRIRWA---TPSTVEPVVFKFLEIGVELK 63
Query: 398 KSHVAXEGLFQYRNXFQSVNVGSLGAG 478
K + +GL QY+ Q G + G
Sbjct: 64 KGKLLKDGLHQYKKLIQGSTEGLVSVG 90
>UniRef50_Q5CS35 Cluster: Putative eukaryotic translation initiation
factor 3; n=2; Cryptosporidium|Rep: Putative eukaryotic
translation initiation factor 3 - Cryptosporidium parvum
Iowa II
Length = 1030
Score = 57.2 bits (132), Expect = 6e-07
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
+PENA++R E + + AL L V + ++ + +S + + Y+ L VDL+K
Sbjct: 6 KPENAIRRVEELRSIGQDETALQLLHSVVNHRRFRVHGWDSSQELMMIQYIILSVDLQKP 65
Query: 404 HVAXEGLFQYRNXFQSVNVGSLG 472
+A EGL QYR N+GSLG
Sbjct: 66 RMAREGLHQYRYVTHQSNIGSLG 88
>UniRef50_Q5C2T9 Cluster: SJCHGC08842 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08842 protein - Schistosoma
japonicum (Blood fluke)
Length = 225
Score = 57.2 bits (132), Expect = 6e-07
Identities = 44/154 (28%), Positives = 69/154 (44%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
+PE AL +A E + DK + AL+ L EV R + A W + VL+ + ++ELCV+LRK+
Sbjct: 14 KPETALTKARELIKCDKKSNALEILYEVMRVRR-AKQW-QKVLEELMMLFVELCVELRKN 71
Query: 404 HVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMXXITLXT 583
+ ++QY+N N SL + + E A + + L T
Sbjct: 72 VHFRKAIYQYKNMSVMENTVSLEQVIRYYLDQIKSRTEEAQE-VSKSAIMDIEDLDILET 130
Query: 584 PEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
PE ++ DR PW+K LW+
Sbjct: 131 PESLMLNA-VSKEGTQDR-SARTILMPWLKFLWD 162
>UniRef50_Q5KGK5 Cluster: Eukaryotic translation initiation factor 3
110 kDa subunit (Eif3 p110), putative; n=1;
Filobasidiella neoformans|Rep: Eukaryotic translation
initiation factor 3 110 kDa subunit (Eif3 p110),
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 952
Score = 56.8 bits (131), Expect = 8e-07
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPA---RALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDL 394
+PENALKR+ E + L P +A D L EVF++ ++ +VL+PI +++LCV L
Sbjct: 7 KPENALKRSEELLALGTPQSQQQAFDNLVEVFQSKRFKQT-PINVLEPIVTKFIDLCVVL 65
Query: 395 -RKSHVAXEGLFQYRNXFQSVNVGSL 469
RK+H A GL +++ Q+ NVG++
Sbjct: 66 SRKAH-AKSGLLVFKSAAQTTNVGAI 90
>UniRef50_Q4UGH6 Cluster: Eukaryotic translation initiation factor 3
subunit 10, putative; n=3; Piroplasmida|Rep: Eukaryotic
translation initiation factor 3 subunit 10, putative -
Theileria annulata
Length = 1110
Score = 55.6 bits (128), Expect = 2e-06
Identities = 32/83 (38%), Positives = 42/83 (50%)
Frame = +2
Query: 221 QRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRK 400
Q+PENALKRA E + + AL L + + + V + I Y+ LC+D K
Sbjct: 5 QKPENALKRAAELRAIGQSDEALVILHSAIGHRFFRIQGWDMVQEQIMLEYVALCIDQDK 64
Query: 401 SHVAXEGLFQYRNXFQSVNVGSL 469
+A EGL QYR Q NV SL
Sbjct: 65 LRLAREGLHQYRLISQHANVSSL 87
>UniRef50_A3GI11 Cluster: Translation initiation factor 3, subunit
a; n=5; Saccharomycetales|Rep: Translation initiation
factor 3, subunit a - Pichia stipitis (Yeast)
Length = 887
Score = 54.0 bits (124), Expect = 6e-06
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +2
Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
RPEN LKRA + + + + ALD L ++ + + Y E L+PI +EL VDLR+
Sbjct: 12 RPENVLKRAEDLIAVGQREAALDVLYDLITSKRIRYLQVED-LEPIALLLIELAVDLRRG 70
Query: 404 HVAXEGLFQYRNXFQSVNVG 463
+A + L QY+ Q + G
Sbjct: 71 KLAKDALHQYKKNVQMLENG 90
>UniRef50_Q8I5S6 Cluster: Eukaryotic translation initiation factor 3
subunit 10, putative; n=8; Plasmodium|Rep: Eukaryotic
translation initiation factor 3 subunit 10, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1377
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +2
Query: 221 QRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRK 400
Q+PENALKRA E + + AL L + + + + I Y+E C+ L K
Sbjct: 5 QKPENALKRAEELQFIGQNEDALQILHSAIGHRTFRLQGWHILQEQIMLRYIEFCLYLEK 64
Query: 401 SHVAXEGLFQYRNXFQSVNVGSLG 472
+ +GL QYR Q N+ SLG
Sbjct: 65 LSLVKDGLHQYRIICQHGNIASLG 88
>UniRef50_Q5DFN4 Cluster: SJCHGC03815 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03815 protein - Schistosoma
japonicum (Blood fluke)
Length = 103
Score = 35.1 bits (77), Expect = 2.8
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 274 FVQIHELIGPFKGIFRSLTVSR-HFLYITFYFINTISSIL 158
++ IH L+ PF+ F +T+SR H Y+ F+ ++ +++
Sbjct: 30 YISIHFLVFPFRHFFNKITISRGHIFYLLFFSCTSLGNVI 69
>UniRef50_Q12830 Cluster: Nucleosome-remodeling factor subunit BPTF;
n=27; Tetrapoda|Rep: Nucleosome-remodeling factor subunit
BPTF - Homo sapiens (Human)
Length = 2907
Score = 33.5 bits (73), Expect = 8.5
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 134 SVFSPKPK*NRRNCV-NEVESDIKKMARYGQRPENALKRANE-FMDLDKPARALDTLQEV 307
S+ SP+ K ++N + N++E + +A GQ P + + N+ F+D K A A D +
Sbjct: 1158 SIRSPETKCPKQNSIENDIEEKVSDLASRGQEPSKSKTKGNDFFIDDSKLASADDIGTLI 1217
Query: 308 FRNXK 322
+N K
Sbjct: 1218 CKNKK 1222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,842,171
Number of Sequences: 1657284
Number of extensions: 15356184
Number of successful extensions: 29943
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 28985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29900
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 92264799902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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