Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M05
         (985 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   8.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   8.4  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 326 PIXCYGKLPVRCLGPLLVCP 267
           P   Y ++P RC G L  CP
Sbjct: 338 PYTMYFRMPHRCHGNLQSCP 357


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 813 NPESLVAPLXTTPXGSIFCXTXXXVTPXNPYPLSKP 920
           +P++  A   +TP    F      +TP N  PL  P
Sbjct: 82  SPQTQPARFYSTPIVPHFAYNHNPLTPPNSEPLVSP 117


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 774 LPTPVXXXPRNXXNPESLVAP 836
           LP P    P+   N E L+AP
Sbjct: 236 LPKPTPLVPQQGFNMERLLAP 256


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 15/55 (27%), Positives = 20/55 (36%)
 Frame = +3

Query: 309 SVTXNGPTTGPNLSYNQSCSNTWNFALIYVNLMSQXKVCSSTETCSNQLMLGPWE 473
           S   N P    N  YNQ+ SN  N+   +     Q K C   +      +   WE
Sbjct: 223 SYQFNDPQFNFNYQYNQAYSNYNNYQEGFSCQYYQGKNCVGGKVDETAGVYSGWE 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,548
Number of Sequences: 336
Number of extensions: 3867
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27926910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)