Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M05
         (985 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117...    69   4e-12
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328...    29   7.5  
11_06_0727 - 26709399-26710863,26713529-26713898,26714115-26714421     28   9.9  
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043...    28   9.9  
04_04_1341 - 32768785-32768847,32770469-32770582,32770809-327708...    28   9.9  

>01_01_0128 -
           1167904-1168749,1168790-1168863,1169419-1169491,
           1171148-1171398,1171442-1171687,1172220-1172415,
           1172796-1172876,1172966-1173169,1173671-1173880,
           1173953-1174174,1174437-1174480,1174974-1175052,
           1175066-1175227,1175337-1175564,1175786-1175815,
           1175905-1176273,1176356-1176571,1177202-1177683,
           1177930-1177975
          Length = 1352

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 49/154 (31%), Positives = 66/154 (42%)
 Frame = +2

Query: 224 RPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQPIXFXYLELCVDLRKS 403
           +PENALKRA E + + +   AL  L ++  + ++  +W +  L+ I   Y+ELCVDLRK 
Sbjct: 6   KPENALKRAEELIHVGQKQAALQALHDLITSKRYR-SWQKP-LERIMMKYVELCVDLRKG 63

Query: 404 HVAXEGLFQYRNXFQSVNVGSLGAGYKRLSPYGRGTXETAXVFIDPXXHRPLMXXITLXT 583
             A +GL QYR   Q VNV SL    K          E A            +  +    
Sbjct: 64  RFAKDGLIQYRIVCQQVNVSSLEEVIKHFMQLSNEKAEQARNQAQALEDALDVEDLEADK 123

Query: 584 PEXILPECRCXGXXXPDRIGXNXYSRPWVKSLWE 685
               L      G    DR     +  PW K LWE
Sbjct: 124 RPEDLMLSYVSGEKGKDR-SDREHVTPWFKFLWE 156


>05_03_0604 -
           16132173-16132391,16132488-16132556,16132824-16132898,
           16132981-16133113,16133188-16133297,16133360-16133407,
           16133657-16133983,16135006-16135233,16135360-16135689,
           16135780-16136586
          Length = 781

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +3

Query: 246 GPMSSWIWTNQQGP*TPYRKFSVTXNGPTTGPNLSYNQSCSNTWNFALIYVNL 404
           G  +SW  T Q     P+R F V    P TG         SNTWN  + ++ L
Sbjct: 733 GQFASWPITGQTAL-LPFRFFRVMLTAPATG--------VSNTWNLCICFLEL 776


>11_06_0727 - 26709399-26710863,26713529-26713898,26714115-26714421
          Length = 713

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
 Frame = -1

Query: 214 SRHFLYITFYFINTIS--------SILFRFRRENRIPPAPASHA 107
           + ++ YI FY+ N IS        S+LF    + R PPAP   A
Sbjct: 53  TNYWRYIVFYWFNAISFAASLVVVSLLFLLLHKGRPPPAPGDQA 96


>10_07_0063 -
           12502305-12503361,12503567-12503668,12504251-12504378,
           12504653-12504764,12504876-12504927,12505260-12505517,
           12505943-12506079,12506296-12506606
          Length = 718

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 15/56 (26%), Positives = 21/56 (37%)
 Frame = +3

Query: 210 RDTVKDRKMPLNGPMSSWIWTNQQGP*TPYRKFSVTXNGPTTGPNLSYNQSCSNTW 377
           R  +  R  P   P  +  +T QQ P   YR  +    G T+     +    SN W
Sbjct: 524 RQEISSRPTPTPTPQQAVSYTQQQPPNHQYRNEAFWQQGGTSTSRTGFMDRQSNNW 579


>04_04_1341 -
           32768785-32768847,32770469-32770582,32770809-32770858,
           32770940-32771033,32771144-32771221,32771397-32771472,
           32771557-32771651,32771748-32771927,32772491-32772802,
           32773122-32773670
          Length = 536

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 874 PXXSSHRXTLTHFQNPXPHTRCPXSTQALXSHP 972
           P   + R  L+H + P PH RC  +  +L S P
Sbjct: 3   PPLQAQRLLLSHRRLPSPHLRCFTAVSSLPSAP 35


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,303,132
Number of Sequences: 37544
Number of extensions: 438423
Number of successful extensions: 881
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2870111300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)