Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M05
         (985 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    27   0.26 
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              24   2.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   3.2  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 528 TXAVSXVPLP--YGDSLL*PAPKDPTLTDW 445
           T +V+ VP+   +GD++L P+PK P    W
Sbjct: 185 TASVAFVPISGWHGDNMLEPSPKTPWYKGW 214


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 13/68 (19%), Positives = 34/68 (50%)
 Frame = +2

Query: 176 VNEVESDIKKMARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQ 355
           +++V+   K  +   Q+  + +   N  ++ +KP R  + + + F     + N+ E+++Q
Sbjct: 26  LHDVQEICKTESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENIVQ 85

Query: 356 PIXFXYLE 379
            +   YL+
Sbjct: 86  ELTSIYLD 93


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 13/68 (19%), Positives = 33/68 (48%)
 Frame = +2

Query: 176 VNEVESDIKKMARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNXKWAYNWSESVLQ 355
           + +V+   K  +   Q+  + +   N  ++ +KP R  + + + F     + N+ E+++Q
Sbjct: 26  LRDVQEICKAESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENIVQ 85

Query: 356 PIXFXYLE 379
            +   YL+
Sbjct: 86  ELTSIYLD 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,949
Number of Sequences: 438
Number of extensions: 5186
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)