Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M03
(945 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.86
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.86
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.86
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.86
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.86
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 25 0.86
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.86
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.1
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 24 2.0
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 4.6
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 8.0
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 8.0
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 536 RVRSWXXDHKCSGPNIISYGVSP 468
R W +HK + NI+ Y +SP
Sbjct: 271 RRMKWKKEHKMASMNIVPYHMSP 293
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 536 RVRSWXXDHKCSGPNIISYGVSP 468
R W +HK + NI+ Y +SP
Sbjct: 271 RRMKWKKEHKMASMNIVPYHMSP 293
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 536 RVRSWXXDHKCSGPNIISYGVSP 468
R W +HK + NI+ Y +SP
Sbjct: 271 RRMKWKKEHKMASMNIVPYHMSP 293
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 536 RVRSWXXDHKCSGPNIISYGVSP 468
R W +HK + NI+ Y +SP
Sbjct: 227 RRMKWKKEHKMASMNIVPYHMSP 249
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 536 RVRSWXXDHKCSGPNIISYGVSP 468
R W +HK + NI+ Y +SP
Sbjct: 271 RRMKWKKEHKMASMNIVPYHMSP 293
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 536 RVRSWXXDHKCSGPNIISYGVSP 468
R W +HK + NI+ Y +SP
Sbjct: 59 RRMKWKKEHKMASMNIVPYHMSP 81
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 536 RVRSWXXDHKCSGPNIISYGVSP 468
R W +HK + NI+ Y +SP
Sbjct: 271 RRMKWKKEHKMASMNIVPYHMSP 293
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 307 KMRGSMLSPXKF--KPFSNEGKPLVVQFTVKHEQDID 411
++ ++L P +P +NE +PL V+F + +Q ID
Sbjct: 6 RLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQIID 42
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 307 KMRGSMLSPXKF--KPFSNEGKPLVVQFTVKHEQDID 411
++ ++L P +P +NE +PL V+F + +Q ID
Sbjct: 6 RLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQIID 42
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 307 KMRGSMLSPXKF--KPFSNEGKPLVVQFTVKHEQDID 411
++ ++L P +P +NE +PL V+F + +Q ID
Sbjct: 6 RLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQIID 42
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 307 KMRGSMLSPXKF--KPFSNEGKPLVVQFTVKHEQDID 411
++ ++L P +P +NE +PL V+F + +Q ID
Sbjct: 6 RLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQIID 42
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 307 KMRGSMLSPXKF--KPFSNEGKPLVVQFTVKHEQDID 411
++ ++L P +P +NE +PL V+F + +Q ID
Sbjct: 6 RLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQIID 42
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 793 PPPXXPPPXXXXPXPPSRPXXPXPPXPPXXXP 888
P P PP P P P P PP P
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 799 GGGXGGGXEWXTGVXGG 749
GGG GGG + G GG
Sbjct: 92 GGGRGGGRDGDRGDGGG 108
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +2
Query: 851 PPXXPLXPPPPXXXPPXXN 907
PP P PPP P N
Sbjct: 21 PPHNPAYSPPPSYCDPWYN 39
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 8.0
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 198 FPTNHQETSPQRIH 157
FP NH P+++H
Sbjct: 41 FPLNHLNEEPEKLH 54
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,008
Number of Sequences: 336
Number of extensions: 4265
Number of successful extensions: 23
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26582281
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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