Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M01
         (943 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    46   3e-07
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    36   3e-04

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 46.4 bits (105), Expect = 3e-07
 Identities = 25/83 (30%), Positives = 40/83 (48%)
 Frame = +2

Query: 362 LPRGETFVHTNELQMEEAXKXFRVLYYAKDFDVFMRTACWMREXINGGMFVYAFTAXCFH 541
           L R E F        + A K  R+   A+  D  +  A + R+ +N  +F YAF+    H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 542 RTDCKGLYLPAPYEIYPYFFVDA 610
           R D + L LP+   ++P  +VD+
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDS 156


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +2

Query: 446 KDFDVFMRTACWMREXINGGMFVYAFTAXCFHRTDCKGLYLPAPYEIYPYFFVDA 610
           ++ D  +  A + R+ +N  +F YA +    HR D + + LP+  E +P  +VD+
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDS 156



 Score = 25.8 bits (54), Expect = 0.49
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +2

Query: 263 KEIAKEYNIEKSCDKYMNVXVVKQFMEMYKMGMLPRGETFVHTNELQMEEAXKXFRVL 436
           ++I   YN E+ C+K         F E  K    P+ ++ V +       A +  R L
Sbjct: 237 QQIIARYNFERLCNKLKRATRFNDFNEAIKEAYFPKLDSLVSSRAWPSRVANQKLRDL 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,491
Number of Sequences: 336
Number of extensions: 2970
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26478848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)