Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L24
         (1001 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   6.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   8.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   8.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 111 HFKLXXXXXXQFICPRCPFTSK 176
           H K+      +  CP+CPF ++
Sbjct: 220 HSKVHIREDKRLTCPKCPFITE 241


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +2

Query: 134 LVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATW 250
           L  +++ + SI+++  + LKT+     DKL +  + + W
Sbjct: 104 LYQVFVFRRSIYLQIKERLKTQGISHLDKLQLGQYFSPW 142


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 142 NLSAQDVHSHQRFRRPEDKAGGSRRQARRDR 234
           N   ++ H  +   R   ++GG RRQ R  R
Sbjct: 565 NHMVKNSHYKEHIMRSITESGGRRRQTREKR 595


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 399 VKNGKKLDEFSW 434
           V+NGKK+ +F+W
Sbjct: 40  VENGKKVFKFAW 51


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 399 VKNGKKLDEFSW 434
           V+NGKK+ +F+W
Sbjct: 40  VENGKKVFKFAW 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,103
Number of Sequences: 336
Number of extensions: 2703
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28547508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)