Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L21
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 45 7e-05
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 45 7e-05
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 38 0.010
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 38 0.010
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.52
Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical pr... 32 0.68
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 32 0.68
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 32 0.68
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 32 0.68
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.68
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 32 0.68
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 32 0.68
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 32 0.68
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.68
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.68
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 31 1.2
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 31 1.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.6
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.8
AC006641-7|AAF39814.2| 133|Caenorhabditis elegans Hypothetical ... 29 4.8
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 29 6.4
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.4
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 28 8.4
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 45.2 bits (102), Expect = 7e-05
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 214 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQ 393
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 394 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSASEE 540
+ D T + N+++V+ Y + + T L+++ ++++FS +E+
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQ 120
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 45.2 bits (102), Expect = 7e-05
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 214 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQ 393
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 394 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSASEE 540
+ D T + N+++V+ Y + + T L+++ ++++FS +E+
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQ 120
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 241 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFDPKF 420
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 421 LTV--ANKIYVSDQYKLADAFSRTA 489
+ V ANK+Y+ + + F TA
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTA 105
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 241 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFDPKF 420
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 421 LTV--ANKIYVSDQYKLADAFSRTA 489
+ V ANK+Y+ + + F TA
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTA 105
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.30
Identities = 25/88 (28%), Positives = 27/88 (30%)
Frame = +2
Query: 674 LARSXXPPVXQKKTIPPSXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXX 853
LA S PP PP T S S PP +P P PP P
Sbjct: 249 LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPPRAGSPPPPPP-PRG 305
Query: 854 TXPXXXXPPPXPSSXPPXPXXXXPXXXP 937
+ P PPP PP P P
Sbjct: 306 SPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 719 PPSXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSX 898
PP P A S PP +P P T P P PPP +
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 899 PPXP 910
PP P
Sbjct: 297 PPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.30
Identities = 25/88 (28%), Positives = 27/88 (30%)
Frame = +2
Query: 674 LARSXXPPVXQKKTIPPSXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXX 853
LA S PP PP T S S PP +P P PP P
Sbjct: 270 LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPPRAGSPPPPPP-PRG 326
Query: 854 TXPXXXXPPPXPSSXPPXPXXXXPXXXP 937
+ P PPP PP P P
Sbjct: 327 SPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 719 PPSXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSX 898
PP P A S PP +P P T P P PPP +
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 899 PPXP 910
PP P
Sbjct: 318 PPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.30
Identities = 25/88 (28%), Positives = 27/88 (30%)
Frame = +2
Query: 674 LARSXXPPVXQKKTIPPSXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXX 853
LA S PP PP T S S PP +P P PP P
Sbjct: 255 LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPPRAGSPPPPPP-PRG 311
Query: 854 TXPXXXXPPPXPSSXPPXPXXXXPXXXP 937
+ P PPP PP P P
Sbjct: 312 SPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 719 PPSXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSX 898
PP P A S PP +P P T P P PPP +
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 899 PPXP 910
PP P
Sbjct: 303 PPPP 306
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 782 PPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXP 889
PP P P I+ L PP P P PPP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical
protein F25D1.2 protein.
Length = 357
Score = 31.9 bits (69), Expect = 0.68
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -1
Query: 594 LCVXESVRPPNGLXISAAF-FGGAEVNVVHFASEQIRCSGERVGQLILVGNVYFIGDSQE 418
L V ES+RP N L ++AAF G N + SE I + G G +Y I E
Sbjct: 109 LAVPESMRPTNFLFLAAAFSMGTFLANSMFLLSELISPTFLSAGLTASAGILYLILRPDE 168
Query: 417 FRVEFCVTLI 388
+ E C +
Sbjct: 169 YPTEECTETV 178
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 432
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 433 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
N ++ +K+ ++ L+ + +++F E
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKE 123
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 432
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 433 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
N ++ +K+ ++ L+ + +++F E
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKE 123
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 432
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 433 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
N ++ +K+ ++ L+ + +++F E
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKE 123
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +2
Query: 725 SXNTPSXXTAHAVSXXHXLPPTXXTPXPX-ITXLXXXDPPIPXXTXPXXXXPPPXPSSXP 901
S TP A +P +P P ++ PP+P P PPP P P
Sbjct: 462 SSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPP 521
Query: 902 P 904
P
Sbjct: 522 P 522
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 432
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 433 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
N ++ +K+ ++ L+ + +++F E
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKE 123
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 432
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 433 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
N ++ +K+ ++ L+ + +++F E
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKE 123
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 432
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 433 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
N ++ +K+ ++ L+ + +++F E
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKE 123
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +2
Query: 782 PPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPPXPXXXXPXXXP 937
PP P P PP P P PPP P+S PP P P P
Sbjct: 73 PPLPPPPLPLSNPPAKPTPP-PPPPKPTIR-PPPIPASPPPRPPASEPVGIP 122
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +2
Query: 782 PPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPPXPXXXXPXXXP 937
PP P P PP P P PPP P+S PP P P P
Sbjct: 295 PPLPPPPLPLSNPPAKPTPP-PPPPKPTIR-PPPIPASPPPRPPASEPVGIP 344
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 205 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE--STHTY 378
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 379 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
+ + VAN I+ + + + + L+ + +NF E
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQE 132
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 205 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE--STHTY 378
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 379 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSASE 537
+ + VAN I+ + + + + L+ + +NF E
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQE 132
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -1
Query: 942 WXGXXXGXXXKGXGGXEXGXGGGXXXXGXVXXGMGGSXXXXWVXXGXGVXXVGG 781
+ G G G GG G GGG G GMGG G G GG
Sbjct: 137 YGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGG 190
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 782 PPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPPXP 910
PP P P IP P PPP P PP P
Sbjct: 328 PPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPP 370
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +2
Query: 785 PTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSS--XPPXP 910
P P P +T + PP P T PPP PSS PP P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMT----PRPPPPPSSGMWPPPP 300
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 817 PXXXXRPPHSLXHXPXPPXPPPXXXFXPXXPFXPXXXXXPXP 942
P RPP PP PPP P P P P P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 725 SXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPP 904
S +TP+ H L P P P + P P P P P + PP
Sbjct: 551 SYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPP 610
Query: 905 XPXXXXP 925
P P
Sbjct: 611 PPPPPPP 617
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/67 (25%), Positives = 21/67 (31%)
Frame = +2
Query: 725 SXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPP 904
S +TP+ H L P P P + P P P P P + PP
Sbjct: 377 SYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPP 436
Query: 905 XPXXXXP 925
P P
Sbjct: 437 PPPPPPP 443
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +2
Query: 785 PTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSS--XPPXP 910
P P P +T + PP P T PPP PSS PP P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMT----PRPPPPPSSGMWPPPP 310
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 817 PXXXXRPPHSLXHXPXPPXPPPXXXFXPXXPFXPXXXXXPXP 942
P RPP PP PPP P P P P P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/68 (22%), Positives = 21/68 (30%)
Frame = +2
Query: 722 PSXNTPSXXTAHAVSXXHXLPPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXP 901
P+ P +A + TP P + +P P PPP + P
Sbjct: 132 PAKPKPQTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAP 191
Query: 902 PXPXXXXP 925
P P P
Sbjct: 192 PPPTTKAP 199
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 782 PPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPPXPXXXXPXXXP 937
PP P P PP P PP P PP P P P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 782 PPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPPXP 910
PP P P I PP P PP P PP P
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>AC006641-7|AAF39814.2| 133|Caenorhabditis elegans Hypothetical
protein F45D11.5 protein.
Length = 133
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +2
Query: 461 SWPTRSPEQRI-CSEAKWTTLTSAPPKNAADIXN 559
SWP P RI CSE + + P NAAD N
Sbjct: 17 SWPPIRPTSRIFCSETSQSPEVTLPGVNAADFQN 50
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 88 TVMDKLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 267
T DK LV + FG+ FS RLG+ ++K L+ + N+A KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/66 (25%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 719 PPSXNTPSXXTAHAVSXXHXLPPTXXTPX--PXITXLXXXDPPIPXXTXPXXXXPPPXPS 892
PPS S ++ PP P P ++ PP+ P PP S
Sbjct: 459 PPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPPAS 518
Query: 893 SXPPXP 910
S P P
Sbjct: 519 SARPHP 524
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/66 (25%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 719 PPSXNTPSXXTAHAVSXXHXLPPTXXTPX--PXITXLXXXDPPIPXXTXPXXXXPPPXPS 892
PPS S ++ PP P P ++ PP+ P PP S
Sbjct: 523 PPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPPAS 582
Query: 893 SXPPXP 910
S P P
Sbjct: 583 SARPHP 588
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 779 LPPTXXTPXPXITXLXXXDPPIPXXTXPXXXXPPPXPSSXPPXP 910
LPP P P PP+P P PPP P PP P
Sbjct: 52 LPPGQSIPKPSF----FIPPPVPNGFIP----PPPGPGGIPPPP 87
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 941 GXGXXXXXGXKGXXGXKXXXGGGXGGXGXWXREWGGRXXXXG 816
G G G G G GG G G W R GGR G
Sbjct: 57 GWGGRGGWGRGGGRGYGGRGGGWGGRGGGWGRGGGGRGFYGG 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,716,606
Number of Sequences: 27780
Number of extensions: 368423
Number of successful extensions: 1984
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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