Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L19
(914 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 43 3e-04
SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0) 39 0.006
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 36 0.046
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 34 0.18
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041) 32 0.74
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 31 1.3
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 30 2.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.0
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.2
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.2
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 5.2
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034) 28 9.2
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P P PP P PP P P P PPP P PPPP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 897 XPXP 908
P P
Sbjct: 427 PPPP 430
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P P PP P PP P P P PPP P PPPP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 897 XP 902
P
Sbjct: 430 PP 431
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +3
Query: 735 PXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXPXP 908
P PP P PP P P P PPP P PPPP P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P P PP P PP P P P PPP P PPPP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P PP P PP P P P PPP P PPPP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Query: 897 XP 902
P
Sbjct: 431 PP 432
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 718 PNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXXXXXPPPPXX 897
P PP PP P P P P P P P PPPP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 898 PXXP 909
P P
Sbjct: 428 PPPP 431
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +1
Query: 751 PPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXXXXXPPPPXXPXXP 909
PP P P P P P P P PPPP P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 718 PNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXXXXXPPPPXX 897
P PP PP P P P P P P P PPPP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPP-PPPPPPPPAPPPPPPPPP 428
Query: 898 PXXP 909
P P
Sbjct: 429 PPPP 432
>SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0)
Length = 522
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 237 ACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLT-----GDAKLVEIGGPPYLVPQ 401
A +S+ T+N K + + DL PP + GL G ++V++GGP YL+P
Sbjct: 256 AASMSSRSTSNEKELSKFPVEDVDLYVPPLDELAKGLILLGFGGKPRIVDVGGPAYLLPL 315
Query: 402 VKRDKIYDL 428
+ +KIYD+
Sbjct: 316 PQLNKIYDM 324
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 38.3 bits (85), Expect = 0.009
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPX-QL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPX 893
P +P P PP +P PP P P P PPP P PP P
Sbjct: 127 PPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPP 186
Query: 894 XXPXP 908
P P
Sbjct: 187 YPPPP 191
Score = 36.3 bits (80), Expect = 0.035
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P +P P PP P PP P P P PPP P PPP
Sbjct: 97 PPYPPYPPPPPYPPPPNPPYPPPPNAP---YPPPPNPPYPPPPNAPYPPSPNAPYPPPPN 153
Query: 897 XPXP 908
P P
Sbjct: 154 PPYP 157
Score = 35.5 bits (78), Expect = 0.060
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P +P P PP +P PP P P P + PPP P PPPP
Sbjct: 111 PPNPPYPPPPNAPYPPPPNPPYPP-PPNAPYPPSPNAPYPPPPNPPYP--PPLYPPPPNP 167
Query: 897 XP 902
P
Sbjct: 168 PP 169
Score = 35.1 bits (77), Expect = 0.080
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +3
Query: 726 PXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXP-PPPXXXP 902
P P PP P P P P P + PPP P P PPP P
Sbjct: 159 PLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAP 218
Query: 903 XP 908
P
Sbjct: 219 NP 220
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P P PP P PP P P P + PPP P PP P
Sbjct: 141 PPSPNAPYPP-PPNPP----YPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPY 195
Query: 897 XPXP 908
P P
Sbjct: 196 PPPP 199
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 735 PXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXPXP 908
P PP P PP P P P PPP P PPP P P
Sbjct: 149 PPPPNPPYPPPL--YPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNP 204
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 723 HPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXP-PPPXXX 899
+P P PP P PP P P P + PPP P P PP
Sbjct: 91 NPPYPPPPYPPYPP----PPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNA 146
Query: 900 PXP 908
P P
Sbjct: 147 PYP 149
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = +3
Query: 717 PXHPXXPXP--PXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P P P P +P PP P P + PPP P PPP
Sbjct: 133 PPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPN 192
Query: 891 XXXPXP 908
P P
Sbjct: 193 PPYPPP 198
Score = 31.9 bits (69), Expect = 0.74
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P +P P P P P P P P + PPP P P PP
Sbjct: 164 PPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYP 223
Query: 897 XP 902
P
Sbjct: 224 PP 225
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +3
Query: 717 PXHPXXPXPPXS-PXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPX 893
P P P PP P PP P P P PP P PPP
Sbjct: 167 PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
Query: 894 XXPXP 908
P P
Sbjct: 227 NAPNP 231
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 723 HPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXP 902
HP P P PP P P P PPP P PPP P
Sbjct: 83 HPPTNFSPNPPYPPP---PYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAP 139
Query: 903 XP 908
P
Sbjct: 140 YP 141
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPP 887
P +P P PP P PP P P P PPP P PPP
Sbjct: 185 PPYPPPPNPPY-PPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP---NAPNPPYPPPP 237
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 4/62 (6%)
Frame = +3
Query: 717 PXHPXXPXPPXS----PXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPP 884
P P P PP P PP P P P PP P PP
Sbjct: 109 PPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPP 168
Query: 885 PP 890
PP
Sbjct: 169 PP 170
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P P PP P P P P + PP P P PP
Sbjct: 101 PYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPL 160
Query: 897 XPXP 908
P P
Sbjct: 161 YPPP 164
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 35.9 bits (79), Expect = 0.046
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG G
Sbjct: 812 GGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGGG 871
Query: 727 GCXGTTLR 704
G G ++
Sbjct: 872 GGGGGVIK 879
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G GG G GG G
Sbjct: 806 GYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGG 865
Query: 727 GCXG 716
G G
Sbjct: 866 GGGG 869
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG G GGG G G G GG G GG G G G
Sbjct: 770 GGGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDG 827
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG GGG G G G GG G GG G G G
Sbjct: 771 GGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGG 828
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXG-XXXXXXXGXPXGXXQSXXGGXGXKGGXGX 731
G G GGGG G GGG G G G GG G GG G
Sbjct: 779 GGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGD 838
Query: 730 XG 725
G
Sbjct: 839 GG 840
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G G
Sbjct: 792 GGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGG 851
Query: 727 GCXG 716
G G
Sbjct: 852 GGGG 855
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGG 740
G GGGG G GGG G G G GG G GG
Sbjct: 773 GGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGG 828
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGGG G GGG G G G + GG G GG G
Sbjct: 243 GGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGG 300
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGGG G GGG G G G + GG G GG G
Sbjct: 250 GGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGG 307
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGGG G GGG G G G + GG G GG G
Sbjct: 278 GGGATGGGGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGG 335
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGGG G GGG G G G + GG G GG G
Sbjct: 285 GGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGG 342
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGGG G GGG G G G + GG G GG G
Sbjct: 292 GGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGG 349
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQS-XXGGXGXKGGXGX 731
G G GGGG G GGG G G G GG G GG G
Sbjct: 298 GGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGG 357
Query: 730 XGCXG 716
G G
Sbjct: 358 PGSGG 362
Score = 31.5 bits (68), Expect = 0.98
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXK--GGXG 734
G G GGGG G GGG G G G GG G GG G
Sbjct: 249 GGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGG 308
Query: 733 XXGCXG 716
G G
Sbjct: 309 ATGVGG 314
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G G G
Sbjct: 242 GGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGG 301
Query: 727 GCXG 716
G
Sbjct: 302 ATGG 305
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G G G
Sbjct: 256 GGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGVGGG 315
Query: 727 GCXG 716
G
Sbjct: 316 ATGG 319
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G G G
Sbjct: 270 GGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVG 329
Query: 727 GCXG 716
G
Sbjct: 330 ATGG 333
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGGG G GGG G G G + G G GG G
Sbjct: 264 GGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGG 321
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXK--GGXG 734
G G GGGG G GGG G G G GG G GG G
Sbjct: 284 GGGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGG 343
Query: 733 XXGCXG 716
G G
Sbjct: 344 VTGGGG 349
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKG 743
G G GGGG G GGG G G G GG G G
Sbjct: 313 GGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGGPGSGGCGEDG 367
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXG 725
G GGGG G GGG G G G S GG G GG G G
Sbjct: 163 GRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGSGYGGGGGYGGGGYGG 221
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG GGG G G G GG G GG G
Sbjct: 151 GGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGG-GYGGGGGGYGGSGYG 209
Query: 727 GCXG 716
G G
Sbjct: 210 GGGG 213
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 33.5 bits (73), Expect = 0.24
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +1
Query: 691 PPXRSLXWSPNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXX 870
PP + P P G PP P N P P G P P
Sbjct: 925 PPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPP 984
Query: 871 XXXPPPPXXP 900
PPPP P
Sbjct: 985 PPPPPPPPPP 994
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +1
Query: 691 PPXRSLXWSPNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXX 870
PP P+ PP PP P N P P G P P P P
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTN-KPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 404
Query: 871 XXXPPPPXXP 900
PPP P
Sbjct: 405 PPPPPPTNGP 414
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +3
Query: 711 VVPXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
V P P PP SP PP P P P PPP P PPP
Sbjct: 344 VNPPPPPTNNPP-SPPPPTNN-TPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPT 401
Query: 891 XXXPXP 908
P P
Sbjct: 402 NGPPPP 407
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +3
Query: 723 HPXXPXPPXS---PXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPX 893
+P P PP + P PP P P P PPP P PPP
Sbjct: 353 NPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTN 412
Query: 894 XXP 902
P
Sbjct: 413 GPP 415
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +1
Query: 715 SPNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXXXXXPPPPX 894
+P PP PP P N P P P P P P PPP
Sbjct: 345 NPPPPPTNNPPSPPPPTNN--TPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTN 402
Query: 895 XPXXP 909
P P
Sbjct: 403 GPPPP 407
>SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041)
Length = 154
Score = 31.9 bits (69), Expect = 0.74
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
GGGG G GGG + G G G GG G GG G
Sbjct: 63 GGGGGGGGGGGGGGGGGGGGGDDGDGGGGDGGGGGGGGDGGGGGGGGGGGVG 114
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G G GG G GGG G G G + GG GG G
Sbjct: 48 GAGNGVGAGGCGCGGGNDGGNGGGGAGNGGGGGGAGNGGAAGAAGAGAGGNVGGGGSGGV 107
Query: 727 GCXG 716
G G
Sbjct: 108 GGNG 111
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G G G
Sbjct: 64 GGGGATGGGGGATGGHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATGGGVG 123
Query: 727 GCXG 716
G
Sbjct: 124 ATGG 127
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G G G
Sbjct: 78 GHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATGGGVGATGGHGGATG-GHG 136
Query: 727 GCXG 716
G G
Sbjct: 137 GATG 140
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GG G G + GG GG G
Sbjct: 45 GHGGATGGGGGATGGGATGGGGGATGGGGGATGGHGGATGGGGGATGDGGGATGGGGGAT 104
Query: 727 GCXG 716
G G
Sbjct: 105 GGGG 108
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGG G GGG G G G + G G GG G
Sbjct: 86 GGGATGDGGGATGGGGGATGGGGGATGGHGGATGGGVGATGGHGGATGGHGGATGGHG 143
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 741 PPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXP 902
PP P PP L P P PPP PPPP P
Sbjct: 694 PPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPP 747
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 735 PXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXP 902
P PP P PP P P PPP P PPPP P
Sbjct: 710 PMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLP--PPPPPIDVP 763
Score = 29.1 bits (62), Expect = 5.2
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +3
Query: 696 GXVLXVVPXHPXXPXPPXS---PXPPXQL*XXPX--GXPXXXXXXXPXSXXXPPPXXXXX 860
G L V P P P P S P PP P G P P PPP
Sbjct: 688 GSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPP 747
Query: 861 XXPXXXPPPPXXXPXP 908
PPPP P
Sbjct: 748 PGCAGLPPPPPPIDVP 763
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Frame = +3
Query: 693 PGXVLXVVPXHPXXPXPPX--SPXPPXQL*XXPXGXPXXXXXXXPXSXXXP--PPXXXXX 860
P + +VP P P PP P PP Q P P + P P
Sbjct: 675 PIPIQTMVPPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSA 734
Query: 861 XXPXXXPPPPXXXP 902
P PPPP P
Sbjct: 735 GNPQQQPPPPGQLP 748
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 741 PPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXPXP 908
PP P PP + G P P PPP PPPP P P
Sbjct: 455 PPNLPPPPGGM----RGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPRGMPPP 506
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +3
Query: 714 VPXHPXXPXPPXSPXPPXQL*XX--PXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPP 887
+P P PP P PP + P P PPP P PPP
Sbjct: 427 LPPPPQHTGPP-QPRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPP 485
Query: 888 PXXXPXP 908
P P P
Sbjct: 486 PFGPPPP 492
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +3
Query: 726 PXXPXPPXS----PXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P PP P PP + P G P P PPP P PPPP
Sbjct: 456 PNLPPPPGGMRGMPPPPMGMYPPPRGFP-------PPPFGPPPPFYRGPPPPRGMPPPP 507
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPP 887
P P P PP SP PP P P P PPP P PPP
Sbjct: 212 PPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLP----EPPP---IPNMPPTLPPP 261
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +3
Query: 717 PXHPXXPXPPXS----PXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPP 884
P + P PP S P PP L P + PPP P PP
Sbjct: 313 PLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPP 372
Query: 885 PPXXXPXP 908
PP P
Sbjct: 373 PPPPGRRP 380
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +3
Query: 717 PXHPXXPXPPXS----PXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPP 884
P + P PP S P PP L P + PPP P PP
Sbjct: 225 PLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPP 284
Query: 885 PPXXXPXP 908
PP P
Sbjct: 285 PPPPGRRP 292
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = +1
Query: 673 PXDXXXPPXRSLXWSPNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXX 852
P PP S +P PP PP P + P G P P P
Sbjct: 300 PSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAP--PPPSMGMAPPP 357
Query: 853 XXXXXXXXXPPPPXXPXXP 909
PPPP P
Sbjct: 358 VGGAAPPPPPPPPVGGPPP 376
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +3
Query: 741 PPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXPXP 908
PP P PP P P PP P PPPP P P
Sbjct: 51 PPPPPSPPAAA---PAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAP 103
>SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034)
Length = 472
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQS-XXGGXGXKGGXGX 731
G GGG G GGG G G G S G GG G
Sbjct: 115 GEAGGQAGGGGQAGGQAGSQAGGGAAGGGGQEGGGQGGAQAGGSTSGSSSGGATSGGGGV 174
Query: 730 XGCXGTTL 707
G GT++
Sbjct: 175 SGSSGTSI 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,228,311
Number of Sequences: 59808
Number of extensions: 377298
Number of successful extensions: 1578
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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