Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L19
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53149-6|AAZ82856.1| 284|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.017
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.28
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.66
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.66
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.66
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.66
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 0.87
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 0.87
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 0.87
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 0.87
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 0.87
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 3.5
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 4.6
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 4.6
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 4.6
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 4.6
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 6.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.1
>U53149-6|AAZ82856.1| 284|Caenorhabditis elegans Hypothetical
protein C24B5.4 protein.
Length = 284
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +3
Query: 243 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 422
V L +NF+ VEV++ D PDL++PP+ KS G + ++ E+GGP L P D +
Sbjct: 1 VFQTSLLSNFENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNLYPGFHIDHQF 60
Query: 423 DLAK 434
D+ K
Sbjct: 61 DIPK 64
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGC 722
G GGGG G GGG G G G GG G GG G GC
Sbjct: 119 GGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 178
Query: 721 XG 716
G
Sbjct: 179 GG 180
Score = 35.5 bits (78), Expect = 0.053
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GG G G GGG G G G GG G GG G
Sbjct: 125 GGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Query: 727 GCXG 716
GC G
Sbjct: 185 GCGG 188
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG G GGG G P GG G G G GC G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGG 81
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G P + GG G GG
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPP--PPACGGGCGGGGGGCGG 131
Query: 727 GCXG 716
GC G
Sbjct: 132 GCGG 135
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGG--XGXX 728
G GGGG G GGG G G GG G GG G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Query: 727 GCXG 716
GC G
Sbjct: 84 GCGG 87
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGC 722
G GGGG G GGG G G G GG G GG G GC
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 721 XG 716
G
Sbjct: 140 GG 141
Score = 36.3 bits (80), Expect = 0.031
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Query: 727 GCXG 716
GC G
Sbjct: 146 GCGG 149
Score = 35.5 bits (78), Expect = 0.053
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCG 164
Query: 727 GCXG 716
G G
Sbjct: 165 GGGG 168
Score = 35.1 bits (77), Expect = 0.071
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG G
Sbjct: 113 GGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG---CGGGGGGGCGGGGGG 169
Query: 727 GCXG 716
GC G
Sbjct: 170 GCGG 173
Score = 34.7 bits (76), Expect = 0.093
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G S G G GG G
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 727 GCXG 716
G G
Sbjct: 159 GGGG 162
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGG-XGXKGGXGX 731
G G GGGG G GGG G G G GG G GG
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSS 152
Query: 730 XGCXG 716
GC G
Sbjct: 153 GGCGG 157
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 727 G 725
G
Sbjct: 179 G 179
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGC 722
G GGGG G GGG G G G S GG G GC
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGC 212
Query: 721 XG 716
G
Sbjct: 213 GG 214
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGC 722
G GGGG G GGG G G G GG G GG G GC
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 721 XG 716
G
Sbjct: 140 GG 141
Score = 36.3 bits (80), Expect = 0.031
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Query: 727 GCXG 716
GC G
Sbjct: 146 GCGG 149
Score = 35.5 bits (78), Expect = 0.053
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCG 164
Query: 727 GCXG 716
G G
Sbjct: 165 GGGG 168
Score = 35.1 bits (77), Expect = 0.071
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG G
Sbjct: 113 GGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG---CGGGGGGGCGGGGGG 169
Query: 727 GCXG 716
GC G
Sbjct: 170 GCGG 173
Score = 34.7 bits (76), Expect = 0.093
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G S G G GG G
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 727 GCXG 716
G G
Sbjct: 159 GGGG 162
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGG-XGXKGGXGX 731
G G GGGG G GGG G G G GG G GG
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSS 152
Query: 730 XGCXG 716
GC G
Sbjct: 153 GGCGG 157
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 727 G 725
G
Sbjct: 179 G 179
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGC 722
G GGGG G GGG G G G S GG G GC
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGC 212
Query: 721 XG 716
G
Sbjct: 213 GG 214
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G P GG G G G
Sbjct: 110 GGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGG 169
Query: 727 GCXG 716
G G
Sbjct: 170 GRGG 173
Score = 28.3 bits (60), Expect = 8.1
Identities = 26/97 (26%), Positives = 28/97 (28%)
Frame = -1
Query: 908 GXXGXXGGGGXXXXXXXXXXXGRGXXXGXGPXXXPXXWGXXXGXSKLXXGXGGXRXXWPG 729
G G GG G GRG G WG G G GG G
Sbjct: 41 GGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRG--G 98
Query: 728 GVXGDHXKDRXGGXXXSXGSXRATQXXXXWLGSXXGG 618
G GD + GG G W G+ GG
Sbjct: 99 GGRGDWGGNNNGGGGNWGGGG---NNDGGWGGNNGGG 132
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGG G GGG G G G GG G GG G
Sbjct: 69 GGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGR 128
Query: 727 GCXG 716
G G
Sbjct: 129 GGGG 132
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Frame = +3
Query: 726 PXXPXPPXSPXPPXQL*XXPXGX-----PXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P P P PP P G P P PPP P PPPP
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Query: 891 XXXP 902
P
Sbjct: 368 PSRP 371
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 726 PXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P P +P PP P P P PPP P PPPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPP--PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/64 (25%), Positives = 17/64 (26%)
Frame = +1
Query: 718 PNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXXXXXPPPPXX 897
P PP + PP P P P P P P PPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 898 PXXP 909
P
Sbjct: 324 RFGP 327
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 741 PPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXPXP 908
PP P PP + P P P PPP P PPPP P P
Sbjct: 27 PPPCPPPPPPM-CAPPPLPCPPPPICPPQFCPPPP---MCPPPPPPPPPPMCPPPP 78
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Frame = +3
Query: 726 PXXPXPPXSPXPPXQL*XXPXGX-----PXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P P P PP P G P P PPP P PPPP
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Query: 891 XXXP 902
P
Sbjct: 378 PSRP 381
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 726 PXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P P +P PP P P P PPP P PPPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPP--PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/64 (25%), Positives = 17/64 (26%)
Frame = +1
Query: 718 PNTPPGXFXLXPPXPXXNFXXPXXXPXXXGXXXGPXPXXXPRPXXXXXXXXXXXPPPPXX 897
P PP + PP P P P P P P PPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 898 PXXP 909
P
Sbjct: 334 RFGP 337
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.66
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGGG G GGG G G G GG G GG G
Sbjct: 195 GYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPG------GGYGMGGGGGGG 248
Query: 727 GC 722
GC
Sbjct: 249 GC 250
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGC 722
G GGG G GGG G G P G GG G GG G G
Sbjct: 107 GGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGG--GGGGDFGG 164
Query: 721 XG 716
G
Sbjct: 165 YG 166
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG G GGG G G G GG G GG G G G
Sbjct: 156 GGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGG-GGYGGGGMGG 212
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG G GGG G G G GG G G G G G
Sbjct: 100 GGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGG 157
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG + GGG + G G P Q GG GG G G G
Sbjct: 264 GGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQG 321
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG + GGG + G G P Q GG GG G G G
Sbjct: 227 GGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQG 284
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG + GGG + G G P Q GG GG G G G
Sbjct: 226 GGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQG 283
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG + GGG + G G P Q GG GG G G G
Sbjct: 265 GGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQG 322
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXG 716
GGGG + GGG + G G P Q GG GG G G G
Sbjct: 264 GGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQG 321
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G G GGG G GGG G G G + GG G +GG G
Sbjct: 61 GGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGG-GGGGGNYGGGGGNQGGGGGG 119
Query: 727 G 725
G
Sbjct: 120 G 120
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G G GGGG GGG G G G GG G GG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGG 110
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P PP + PP P P P + PPP P PPP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 897 XPXP 908
P
Sbjct: 318 GGSP 321
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXP--XXXPPPP 890
P P PP PP P P P + PPP P PPPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 891 XXXPXP 908
P
Sbjct: 293 RAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P PP + PP P P P + PPP P PPP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 897 XPXP 908
P
Sbjct: 339 GGSP 342
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXP--XXXPPPP 890
P P PP PP P P P + PPP P PPPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 891 XXXPXP 908
P
Sbjct: 314 RAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXX 896
P P PP + PP P P P + PPP P PPP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 897 XPXP 908
P
Sbjct: 324 GGSP 327
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXP--XXXPPPP 890
P P PP PP P P P + PPP P PPPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 891 XXXPXP 908
P
Sbjct: 299 RAGSPP 304
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +3
Query: 717 PXHPXXPXPPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPP 890
P P P P +P P P P P + P P P PPPP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGX--PXGXXQSXXGGXGXKGGXGXX 728
G GGGG G GGG + P G + GG G GG G
Sbjct: 363 GGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGGGGGYA 422
Query: 727 GCXG 716
G G
Sbjct: 423 GGAG 426
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = +3
Query: 741 PPXSPXPPXQL*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXPPPPXXXPXP 908
P +P PP ++ P P S PPP PPPP P P
Sbjct: 470 PKPAPPPPSRI---PNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = -2
Query: 886 GGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXGCXGTTL 707
GGG G GGG G G G GG G GG G G G
Sbjct: 216 GGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRR 275
Query: 706 RT 701
R+
Sbjct: 276 RS 277
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -2
Query: 886 GGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGG-XGXXGCXGTT 710
GGG G GGG G G G GG G GG G G G
Sbjct: 17 GGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSNGSAGGR 76
Query: 709 LR 704
LR
Sbjct: 77 LR 78
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G GG G G GGG G G P G S GG G G
Sbjct: 56 GGNTGGSGFGGGKAGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFG 111
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G GG G G GGG G G P G S GG G G
Sbjct: 56 GGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFG 111
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 901 GXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXG 734
G GG G G GGG G G P G S GG G G
Sbjct: 56 GGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFG 111
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = -2
Query: 907 GXGXXXGGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXX 728
G GGGG G GGG G G G GG G G
Sbjct: 792 GGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGA 851
Query: 727 G 725
G
Sbjct: 852 G 852
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 889 GGGGXXXGXXXKXXXGGGXXXEXGXXXXXXXGXPXGXXQSXXGGXGXKGGXGXXG 725
GGGG G GGG G G G G G GG G G
Sbjct: 75 GGGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGG 129
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/63 (26%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = +3
Query: 714 VPXHPXXPXPPXSPXPPXQ----L*XXPXGXPXXXXXXXPXSXXXPPPXXXXXXXPXXXP 881
+P +P P PP PP Q + P P + PPP P
Sbjct: 712 IPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFP 771
Query: 882 PPP 890
PPP
Sbjct: 772 PPP 774
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,858
Number of Sequences: 27780
Number of extensions: 306297
Number of successful extensions: 1273
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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