Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L17
         (1002 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    24   2.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    24   2.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.8  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   4.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   8.6  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 644 GRAPNXQTGXFXRGGGXFINAEKTSHT 564
           G  P   TG     GG   NA+ TSHT
Sbjct: 38  GGKPPELTGSTNGDGGARSNADSTSHT 64


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 644 GRAPNXQTGXFXRGGGXFINAEKTSHT 564
           G  P   TG     GG   NA+ TSHT
Sbjct: 194 GGKPPELTGSTNGDGGARSNADSTSHT 220


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 591 ESPPPPREXAGLXIGRSSXSSP 656
           ESPPP  + A   I  S  +SP
Sbjct: 9   ESPPPAPQSAATPISSSGMTSP 30


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/32 (34%), Positives = 12/32 (37%), Gaps = 3/32 (9%)
 Frame = +1

Query: 808 PPLLAXFPXGSPP---PXXXXQXXXPPXXXXP 894
           PP    FP G+PP   P        PP    P
Sbjct: 190 PPSFGIFPGGAPPLVSPFLAAMAHRPPHFAFP 221


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 468 NFTNKAFFSLH 436
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 468 NFTNKAFFSLH 436
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 120 FEDDKYFNRFTVRLPCTSVRQIRQNL 43
           F   KY++ F   L     R+IR+NL
Sbjct: 74  FWKKKYWSEFLANLKLLKGRKIRKNL 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,795
Number of Sequences: 336
Number of extensions: 2900
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28547508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)