Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L17
         (1002 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.6  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   3.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 898 PDXXXKXPXPXPPXNPPXGPXXSHPXXXPXLSP 996
           P+     P P PP  PP GP  S     P   P
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 24.2 bits (50), Expect = 6.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 930  PPXKPPXXPPXXPPXXXPXPXPFS 1001
            P  +PP  PP  PP   P P P +
Sbjct: 577  PNAQPPPAPPPPPPMG-PPPSPLA 599


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = -2

Query: 956 GPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXASXGGL 804
           G  GG  GG G G      G G    GG        GGG   G+ +S GG+
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGG--------GGGS--GRSSSGGGM 691


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 16/55 (29%), Positives = 17/55 (30%)
 Frame = +2

Query: 770 PKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXPTGPXXXPXLXP 934
           P  PP    P  GP   P     PPP+  P         G   P      P L P
Sbjct: 96  PGAPPLLMGP-NGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRPPVMSAAPPQLNP 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,501
Number of Sequences: 2352
Number of extensions: 12339
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110174532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)