Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L17
(1002 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 37 0.026
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.034
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 36 0.045
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.060
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.060
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.060
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 34 0.14
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 34 0.18
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 33 0.24
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.24
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.32
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.32
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.32
Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical pr... 33 0.42
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.56
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.56
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.74
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 32 0.74
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 32 0.74
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.98
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.98
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.98
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 3.9
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.9
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 3.9
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.9
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 5.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.2
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 9.1
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 28 9.1
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 28 9.1
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 28 9.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.1
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 9.1
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 28 9.1
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 9.1
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 36.7 bits (81), Expect = 0.026
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = +1
Query: 790 PXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGP 957
P P PP+ A P PPP PP P P P P PP PP P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPP-----PPPPPPPMCPPPPP 79
Score = 31.5 bits (68), Expect = 0.98
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = +1
Query: 835 GSPP-PXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHPXXXPXLSPFP 1002
G PP P PP P P P PP PP P P P P P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +1
Query: 778 PXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNP 945
P P PPL P PP PP P P P P P +P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +2
Query: 764 CEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXPTGPXXXPXLXPLXT 943
C GPP P P C P PPP PP+ P P P P
Sbjct: 22 CCSMGPPPCPPP-PPPMCAPPPLPCPPPPICPPQ---------FCPPPPMCPPPPPPPPP 71
Query: 944 PXXAPXXPTLP 976
P P P +P
Sbjct: 72 PMCPPPPPPMP 82
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 36.3 bits (80), Expect = 0.034
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = -2
Query: 971 GWXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXASXGGLFTGX 792
GW GP G GG G G G G GG W GGG G GG G
Sbjct: 47 GWGGGGPGWG-RGGGGSGW-GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGR 104
Query: 791 GXWXG 777
G G
Sbjct: 105 GGGGG 109
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/71 (30%), Positives = 23/71 (32%)
Frame = -2
Query: 1001 GKGXRXGXXXGWXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKX 822
G G G GW G G + G G G G G GG GGG G
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
Query: 821 ASXGGLFTGXG 789
GG G G
Sbjct: 121 RGGGGGGRGGG 131
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 36.3 bits (80), Expect = 0.034
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = +1
Query: 748 TAGKNM*TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP 927
+ G + + P P P PP P SP P + PP P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 515
Query: 928 XPPXNPP 948
PP PP
Sbjct: 516 PPPPPPP 522
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +1
Query: 808 PPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHPXXXPX 987
P + P +P P P P P K P P PP PP S P P
Sbjct: 459 PSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPL-PPIATPSSVPPPPPP 517
Query: 988 LSPFP 1002
P P
Sbjct: 518 PPPPP 522
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical protein
T01C3.7 protein.
Length = 352
Score = 35.9 bits (79), Expect = 0.045
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = -2
Query: 1001 GKGXRXGXXXGWXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKX 822
G G R G G G GGF GG G G G G G G G P G
Sbjct: 47 GGGDRGGFRGG-RGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGSPRGGRGSPRGGR 105
Query: 821 ASXGGLFTG 795
GG+ G
Sbjct: 106 GGAGGMRGG 114
Score = 32.3 bits (70), Expect = 0.56
Identities = 26/80 (32%), Positives = 27/80 (33%), Gaps = 5/80 (6%)
Frame = -2
Query: 1001 GKGXRXGXXXGWXXXGPXGGFXGGXGXGXL-XXXSGXGXXXXGGXXXWXXXXGG----GE 837
G+G G G G GGF GG G G G G GG GG G
Sbjct: 34 GRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGS 93
Query: 836 PXGKXASXGGLFTGXGXWXG 777
P G S G G G G
Sbjct: 94 PRGGRGSPRGGRGGAGGMRG 113
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.060
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +1
Query: 835 GSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHPXXXPXLSPFP 1002
GSPPP PP P P P P PP P P S P SP P
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--PTGSLPPPQAGGSPPP 323
Score = 29.9 bits (64), Expect = 3.0
Identities = 34/129 (26%), Positives = 40/129 (31%), Gaps = 4/129 (3%)
Frame = +1
Query: 598 PPPRXKXPVCXLGALPXPRLTXPLXSXVRLXXXVSPHSKXVIRLSTXPGDTAGKNM*TQR 777
PPP+ P+ G+ P P P SP + P AG + R
Sbjct: 241 PPPKGSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPPT---GSPPPPPAGGSPPPPR 293
Query: 778 PXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP---XPPXNPP 948
P P PP P GS PP P P P K P P +PP
Sbjct: 294 AGSPPPP---PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
Query: 949 XG-PXXSHP 972
G P P
Sbjct: 351 TGSPPTGRP 359
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.060
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +1
Query: 835 GSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHPXXXPXLSPFP 1002
GSPPP PP P P P P PP P P S P SP P
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--PTGSLPPPQAGGSPPP 344
Score = 29.9 bits (64), Expect = 3.0
Identities = 34/129 (26%), Positives = 40/129 (31%), Gaps = 4/129 (3%)
Frame = +1
Query: 598 PPPRXKXPVCXLGALPXPRLTXPLXSXVRLXXXVSPHSKXVIRLSTXPGDTAGKNM*TQR 777
PPP+ P+ G+ P P P SP + P AG + R
Sbjct: 262 PPPKGSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPPT---GSPPPPPAGGSPPPPR 314
Query: 778 PXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP---XPPXNPP 948
P P PP P GS PP P P P K P P +PP
Sbjct: 315 AGSPPPP---PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
Query: 949 XG-PXXSHP 972
G P P
Sbjct: 372 TGSPPTGRP 380
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.060
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +1
Query: 835 GSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHPXXXPXLSPFP 1002
GSPPP PP P P P P PP P P S P SP P
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--PTGSLPPPQAGGSPPP 329
Score = 29.9 bits (64), Expect = 3.0
Identities = 34/129 (26%), Positives = 40/129 (31%), Gaps = 4/129 (3%)
Frame = +1
Query: 598 PPPRXKXPVCXLGALPXPRLTXPLXSXVRLXXXVSPHSKXVIRLSTXPGDTAGKNM*TQR 777
PPP+ P+ G+ P P P SP + P AG + R
Sbjct: 247 PPPKGSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPPT---GSPPPPPAGGSPPPPR 299
Query: 778 PXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP---XPPXNPP 948
P P PP P GS PP P P P K P P +PP
Sbjct: 300 AGSPPPP---PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
Query: 949 XG-PXXSHP 972
G P P
Sbjct: 357 TGSPPTGRP 365
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 784 QXPXPVKRP-PLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGP- 957
Q P P P+ P PPP Q PP P P P P PP P P
Sbjct: 36 QPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPC 95
Query: 958 XXSHPXXXPXLSP 996
P P P
Sbjct: 96 MMQRPSFYPSYVP 108
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 6/79 (7%)
Frame = +1
Query: 784 QXPXPVKRPPLLAX----FPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXN--P 945
Q P PPL + P +PPP Q P P P P P P P
Sbjct: 74 QHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPP 133
Query: 946 PXGPXXSHPXXXPXLSPFP 1002
P P +P P P P
Sbjct: 134 PPPPPPHYPPPPPHYPPPP 152
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +1
Query: 772 QRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPX 951
Q P P P P +PPP Q P P P P P PP PP
Sbjct: 89 QNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPA----PAPYQQQPPPPPPPPHYPPP 144
Query: 952 GPXXSHPXXXP 984
P P P
Sbjct: 145 PPHYPPPPPAP 155
Score = 29.9 bits (64), Expect = 3.0
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Frame = +1
Query: 769 TQRPXQXPXPVKRPPLL--AXFPXGS---PPPXXXXQXXXPPXXXXPXPDXXXKXPXPXP 933
T +P P P K P + + P + PPP Q P P P P P P
Sbjct: 23 TPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAP 82
Query: 934 PXNPPXGPXXSHPXXXPXLSPFP 1002
P P + P P +P+P
Sbjct: 83 PL--ASYPQNAVPVPAPPPAPYP 103
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +3
Query: 807 APXAGXFPXXLPPPXTXXPXXXPXXXXXAXXRXXL*XXXAXPPXKPPXXPPXXPPXXXPX 986
AP +P P P P A PP PP PP P P
Sbjct: 96 APPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQ---QQPPPPPPPPHYPPPPPHYPPPP 152
Query: 987 PXPFS 1001
P P S
Sbjct: 153 PAPHS 157
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 829 PXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHP 972
P G+PP Q PP P P PP PP GP HP
Sbjct: 209 PQGAPPMVQQQQMPMPPKPTFAHPG-----PSMGPPMGPPMGPPMGHP 251
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 33.5 bits (73), Expect = 0.24
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Frame = -2
Query: 971 GWXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGG-XXXWXXXXGGGEPXGKXASXGGLFTG 795
GW G GG GG G G G G GG W GGG+ G GG
Sbjct: 147 GWG--GSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQ-GGNQGGGGGRGGN 203
Query: 794 XGXWXGLW 771
G G W
Sbjct: 204 QGGEQGGW 211
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = -2
Query: 995 GXRXGXXXGWXXX-GPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXA 819
G G GW G GG G G G G GG GGG A
Sbjct: 29 GSGIGSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGS-------GGGRGGSGGA 81
Query: 818 SXGGLFTGXGXWXG 777
GG +G G W G
Sbjct: 82 GAGGSGSGSGGWGG 95
Score = 28.3 bits (60), Expect = 9.1
Identities = 23/77 (29%), Positives = 25/77 (32%)
Frame = -2
Query: 1001 GKGXRXGXXXGWXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKX 822
G G G G G GG+ GG G G GG GGG G+
Sbjct: 19 GDGLFGGSDAG-SGIGSSGGW-GGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRG 76
Query: 821 ASXGGLFTGXGXWXGLW 771
S G G G G W
Sbjct: 77 GSGGAGAGGSGSGSGGW 93
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -2
Query: 971 GWXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXASXGG 807
G G GGF GG G G G GG GGG+ G GG
Sbjct: 80 GGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGG 134
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 769 TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPP 948
T P P P PP+ P PPP P P P P P PP
Sbjct: 723 TGGPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 949 XGPXXSHP 972
GP P
Sbjct: 782 GGPPPPPP 789
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 790 PXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSH 969
P P P L G PPP PP P P P PP PP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 970 PXXXP 984
P P
Sbjct: 784 PPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 769 TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPP 948
T P P P PP+ P PPP P P P P P PP
Sbjct: 723 TGGPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 949 XGPXXSHP 972
GP P
Sbjct: 782 GGPPPPPP 789
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 790 PXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSH 969
P P P L G PPP PP P P P PP PP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 970 PXXXP 984
P P
Sbjct: 784 PPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 769 TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPP 948
T P P P PP+ P PPP P P P P P PP
Sbjct: 306 TGGPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Query: 949 XGPXXSHP 972
GP P
Sbjct: 365 GGPPPPPP 372
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 790 PXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSH 969
P P P L G PPP PP P P P PP PP G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 970 PXXXP 984
P P
Sbjct: 367 PPPPP 371
>Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical
protein T19C4.7 protein.
Length = 74
Score = 32.7 bits (71), Expect = 0.42
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -2
Query: 968 WXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXG 828
W GP GG+ GG G G G GG GG P G
Sbjct: 23 WGYGGPYGGYGGGYGGGPWGYGGGWRRRHWGGYGGGPWGGYGGGPWG 69
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +1
Query: 775 RPXQXPXPVKRPPLLAXFPXGSP----PPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXN 942
RP Q P PP P G P PP P P D P P P
Sbjct: 131 RPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPG 190
Query: 943 PPXGP 957
PP P
Sbjct: 191 PPGAP 195
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/90 (26%), Positives = 27/90 (30%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXPT 904
G P G P ++ CEP PP +GP P P P
Sbjct: 124 GLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
Query: 905 GPXXXPXLXPLXTPXXAPXXPTLPXXPXXP 994
GP P P AP P P P P
Sbjct: 184 GPKGPPG------PPGAPGAPGTPGEPGVP 207
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +1
Query: 775 RPXQXPXPVKRPPLLAXFPXGSP----PPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXN 942
RP Q P PP P G P PP P P D P P P
Sbjct: 131 RPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPG 190
Query: 943 PPXGP 957
PP P
Sbjct: 191 PPGAP 195
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/90 (26%), Positives = 27/90 (30%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXPT 904
G P G P ++ CEP PP +GP P P P
Sbjct: 124 GLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
Query: 905 GPXXXPXLXPLXTPXXAPXXPTLPXXPXXP 994
GP P P AP P P P P
Sbjct: 184 GPKGPPG------PPGAPGAPGTPGEPGVP 207
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.9 bits (69), Expect = 0.74
Identities = 17/63 (26%), Positives = 21/63 (33%)
Frame = +1
Query: 748 TAGKNM*TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP 927
+ G + + P P P PP P SP P + PP P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 508
Query: 928 XPP 936
PP
Sbjct: 509 PPP 511
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +3
Query: 765 VNPKAXPXAXTRKKAPXA-GXFPXXLPPPXTXXPXXXPXXXXXAXXRXXL*XXXAXPPXK 941
V P P A K P + G PP T P P + P
Sbjct: 432 VAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPP 491
Query: 942 PPXXPPXXPPXXXPXPXP 995
PP PP P P P P
Sbjct: 492 PPPLPPIATPSSVPPPPP 509
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical protein
C27H5.3 protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.74
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = -2
Query: 1001 GKGXRXGXXXGWXXXGPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXG-K 825
G+G G G+ G GGF GG G G G G + GG G +
Sbjct: 314 GRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDR 373
Query: 824 XASXGGLFTGXGXWXG 777
GG G G G
Sbjct: 374 GGDRGGFRGGRGVGGG 389
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.74
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +1
Query: 775 RPXQXPXPVKRPPLLAXFPXGSP----PPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXN 942
RP Q P PP P G P PP P P D P P P
Sbjct: 131 RPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPKG 190
Query: 943 PPXGP 957
PP P
Sbjct: 191 PPGAP 195
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 7/97 (7%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGP------PXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSX 886
G P G P ++ CEP P P G GP P P P +
Sbjct: 124 GLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
Query: 887 GGXXPTGPXXXPXLXPLXTPXXAP-XXPTLPXXPXXP 994
G P GP P P P +P P P
Sbjct: 184 GPKGPKGPPGAPGAPEHQESQECPRGEPLIPGEPGPP 220
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.98
Identities = 28/95 (29%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAP--PPLXXPPKXP-TXXSXGGX 895
G P G P CEP PP +GP P AP P P P T + G
Sbjct: 126 GTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSP 185
Query: 896 XPTGPXXXPXLXPLXTPXXAPXXPTL--PXXPXXP 994
P GP P P P + P P P
Sbjct: 186 GPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAP 220
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 0.98
Identities = 28/95 (29%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAP--PPLXXPPKXP-TXXSXGGX 895
G P G P CEP PP +GP P AP P P P T + G
Sbjct: 121 GTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSP 180
Query: 896 XPTGPXXXPXLXPLXTPXXAPXXPTL--PXXPXXP 994
P GP P P P + P P P
Sbjct: 181 GPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAP 215
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 0.98
Identities = 28/95 (29%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAP--PPLXXPPKXP-TXXSXGGX 895
G P G P CEP PP +GP P AP P P P T + G
Sbjct: 121 GTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSP 180
Query: 896 XPTGPXXXPXLXPLXTPXXAPXXPTL--PXXPXXP 994
P GP P P P + P P P
Sbjct: 181 GPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAP 215
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = +1
Query: 775 RPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXX---PPXXXXPX-PDXXXKXPXPXPPXN 942
RP Q P PP P G P P PP P PD P P P
Sbjct: 121 RPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIG 180
Query: 943 PPXGP 957
PP P
Sbjct: 181 PPGPP 185
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/90 (26%), Positives = 26/90 (28%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXPT 904
G P G P ++ CEP PP C P P P P G P
Sbjct: 114 GQPGTPGRPPQQPCEPTTPPP---------CQPCPQGPPGPPGQPGIPGDNGPPGEQGPK 164
Query: 905 GPXXXPXLXPLXTPXXAPXXPTLPXXPXXP 994
GP P P P P P P
Sbjct: 165 GPDAAPGEPGPKGPIGPPGPPGQAGAPGEP 194
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +1
Query: 742 GDTAGKNM*TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXP 921
G TA + P + PP P + P Q PP PD P
Sbjct: 299 GSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAPASQ---PPVREPETPDSGYPSP 355
Query: 922 XPXPPXNP-PXGPXXSHP 972
P P +P P P S+P
Sbjct: 356 APQEPAHPSPSYPSPSYP 373
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical protein
F13D12.3 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.7
Identities = 26/97 (26%), Positives = 28/97 (28%), Gaps = 5/97 (5%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXP----PKXPTXXSXGG 892
G P G P PK P P P S PP P P P
Sbjct: 79 GRPSSYGPPQPSYSPPKSSYGRPEPTYSPYSRPSSSYGRPPQFYPAQPGPAVPAVIPPVV 138
Query: 893 XXPTGPXXXPXL-XPLXTPXXAPXXPTLPXXPXXPLF 1000
P P P + P+ P P P P PLF
Sbjct: 139 TQPIVPPPVPEVSEPVPEPPIPAPGPVAPPTPSGPLF 175
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/82 (25%), Positives = 26/82 (31%)
Frame = +2
Query: 722 SGYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXP 901
+G P G P + CEP PP +GP P + P + G P
Sbjct: 128 AGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGP 187
Query: 902 TGPXXXPXLXPLXTPXXAPXXP 967
GP P AP P
Sbjct: 188 AGPKGAPGAPGNPGQAGAPGQP 209
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/82 (25%), Positives = 26/82 (31%)
Frame = +2
Query: 722 SGYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXP 901
+G P G P + CEP PP +GP P + P + G P
Sbjct: 128 AGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGP 187
Query: 902 TGPXXXPXLXPLXTPXXAPXXP 967
GP P AP P
Sbjct: 188 AGPKGAPGAPGNPGQAGAPGQP 209
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/82 (25%), Positives = 26/82 (31%)
Frame = +2
Query: 722 SGYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXP 901
+G P G P + CEP PP +GP P + P + G P
Sbjct: 128 AGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGP 187
Query: 902 TGPXXXPXLXPLXTPXXAPXXP 967
GP P AP P
Sbjct: 188 AGPKGAPGAPGNPGQAGAPGQP 209
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +1
Query: 778 PXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGP 957
P P P PP P PPP PP P P PP GP
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 327
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +1
Query: 739 PGDTAGKNM*TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKX 918
PG T G P P PP + P PPP PP P P
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP-PPPPGMRYPGGMPPP---PPPRYPSAG 359
Query: 919 PX--PXPPXNPPXGPXXSHPXXXPXLSP 996
P P PP + P P H P P
Sbjct: 360 PGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.3 bits (60), Expect = 9.1
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = +1
Query: 769 TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXP----- 933
T RP P PP P +P P PP P P P P
Sbjct: 284 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 934 PXNPPXGPXXSHPXXXPXLSPFP 1002
P P P +P P + P P
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPP 366
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 3/74 (4%)
Frame = +3
Query: 783 PXAXTRKKAPXAGXFPXXLPPPX---TXXPXXXPXXXXXAXXRXXL*XXXAXPPXKPPXX 953
P +K+ G P PPP T P P PP P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRN 182
Query: 954 PPXXPPXXXPXPXP 995
PP PP P P P
Sbjct: 183 PPRTPPSPIPPPPP 196
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/79 (24%), Positives = 23/79 (29%)
Frame = +3
Query: 759 KHVNPKAXPXAXTRKKAPXAGXFPXXLPPPXTXXPXXXPXXXXXAXXRXXL*XXXAXPPX 938
+H + +A P + AG PPP P PP
Sbjct: 114 QHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPR 173
Query: 939 KPPXXPPXXPPXXXPXPXP 995
PP P PP P P P
Sbjct: 174 TPPSPEPRNPPRTPPSPIP 192
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +1
Query: 796 PVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPX---PPXNPPXGPXXS 966
P PP + SPPP + P P P P PP PP P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP-SPEPR 181
Query: 967 HPXXXPXLSPFP 1002
+P P SP P
Sbjct: 182 NPPRTPP-SPIP 192
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +1
Query: 778 PXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGP 957
P P P PP P PPP PP P P PP GP
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 337
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +1
Query: 739 PGDTAGKNM*TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKX 918
PG T G P P PP + P PPP PP P P
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP-PPPPGMRYPGGMPPP---PPPRYPSAG 369
Query: 919 PX--PXPPXNPPXGPXXSHPXXXPXLSP 996
P P PP + P P H P P
Sbjct: 370 PGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.3 bits (60), Expect = 9.1
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = +1
Query: 769 TQRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXP----- 933
T RP P PP P +P P PP P P P P
Sbjct: 294 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 934 PXNPPXGPXXSHPXXXPXLSPFP 1002
P P P +P P + P P
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPP 376
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = -2
Query: 1001 GKGXRXGXXXG-WXXXGPXGGFXGGXGXGXLXXX-SGXGXXXXGGXXXWXXXXGGGEPXG 828
G G G G W GG GG G G +G G GG W GG G
Sbjct: 56 GWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDW-----GGNNNG 110
Query: 827 KXASXGGLFTGXGXWXG 777
+ GG G W G
Sbjct: 111 GGGNWGGGGNNDGGWGG 127
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -1
Query: 1002 GKRGXXGXXGRVGXXGAXXGVXRGXRXGXFXGPVGXXPPXXWXVGXLGGXXRGGG 838
G G G G G G G R G GP G W G GG RGGG
Sbjct: 118 GGNNDGGWGGNNGGGGGGRG--GGGRGGDGRGPPGSNGGGDW--GGNGGGGRGGG 168
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +1
Query: 829 PXGSPP-PXXXXQXXXPPXXXXPXPDXXXKXPXPXP-PXNPPXGPXXSHPXXXPXLS 993
P SPP P PP P P P P P +PP P S P P S
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYS 125
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +1
Query: 829 PXGSPP-PXXXXQXXXPPXXXXPXPDXXXKXPXPXP-PXNPPXGPXXSHPXXXPXLS 993
P SPP P PP P P P P P +PP P S P P S
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYS 347
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 772 QRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP 927
+RP P P P P G PPP Q PP P P P P
Sbjct: 86 RRPQPTPGPPP-PRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYP 136
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 772 QRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP 927
+RP P P P P G PPP Q PP P P P P
Sbjct: 86 RRPQPTPGPPP-PRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYP 136
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 772 QRPXQXPXPVKRPPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXP 927
+RP P P P P G PPP Q PP P P P P
Sbjct: 86 RRPQPTPGPPP-PRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYP 136
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAP--PPLXXPPKXP-TXXSXGGX 895
G P G P CEP PP +GP P AP P P P T + G
Sbjct: 128 GQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLP 187
Query: 896 XPTGPXXXP 922
P GP P
Sbjct: 188 GPRGPPGPP 196
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXPT 904
G P G P ++ CE PP GP P AP + P G P
Sbjct: 115 GMPGNPGKPPQQPCELVTPPPCSPCPAGPPGKPGPQGAPGDIGQPGNPGERGMDGEPGPP 174
Query: 905 GPXXXP 922
GP P
Sbjct: 175 GPTGPP 180
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAP--PPLXXPPKXP-TXXSXGGX 895
G P G P CEP PP +GP P AP P P P T + G
Sbjct: 128 GQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLP 187
Query: 896 XPTGPXXXP 922
P GP P
Sbjct: 188 GPRGPPGPP 196
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -2
Query: 956 GPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXASXGGLFTGXGXWXG 777
GP G GG G G G G GG GGG G + G G G G
Sbjct: 781 GPTGSS-GGGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGAGNG 839
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = -2
Query: 947 GGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXASXGGLFTGXGXWXG 777
GG+ G G G G G G + GGG G S G G G + G
Sbjct: 510 GGYGGDMGYGAYGGGYGGGYGGPGAYGDFGAYGGGGFRGGMRGSPRGGMGGGGGFRG 566
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Frame = +1
Query: 790 PXPVKRPPLLAXF-----PXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNP 945
P P PPL++ P PPP PP P K P P P P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTPRPKECP 124
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 924 AXPPXKPPXXPPXXPPXXXPXPXP 995
A PP PP PP P P P P
Sbjct: 481 ARPPPSPPALPPALPNPNEPPPPP 504
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical protein
K01A6.4 protein.
Length = 284
Score = 28.7 bits (61), Expect = 6.9
Identities = 28/104 (26%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Frame = -2
Query: 1001 GKGXRXGXXXGWXXX----GPXGGFXGGX---GXGXLXXXSGXGXXXXGGXXXWXXXXGG 843
G+G + G G+ G GF GG G G G G GG G
Sbjct: 42 GQGQQVGSQQGFGGMQGGFGGQSGFGGGSSQGGFGGFGQQGGFGGNSQGGFGGQQGGFSG 101
Query: 842 GEPXGKXASXGGLFTGXGXWXGLWVHMFFPAVSPGSVDNRITXF 711
P G GG F G G G F S G + + F
Sbjct: 102 NSPGGFEGQQGG-FGGFGQQVGFGGQGGFGGNSQGGFGGQQSGF 144
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 9.1
Identities = 24/90 (26%), Positives = 25/90 (27%)
Frame = +2
Query: 725 GYPQXXGIPXEKTCEPKGPPXGXXP*KGPXCWPFSXXAPPPLXXPPKXPTXXSXGGXXPT 904
G P G P + CEP PP P C P AP P G P
Sbjct: 125 GAPGHPGKPPQSPCEPLTPPPC------PACPPGPPGAPGAPGKPGSEGPPGPPGHDGPN 178
Query: 905 GPXXXPXLXPLXTPXXAPXXPTLPXXPXXP 994
G P P P P P P
Sbjct: 179 GGPGQPGQPGPHGPNGHPGKPGSQGPPGPP 208
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +1
Query: 808 PPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHP 972
PP G P PP P P P P P P G +HP
Sbjct: 263 PPHQRYHTPGRQDPVDDMSRFIPPASIRPPPMNMHTRPQPMPQQLPSVGATFAHP 317
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +1
Query: 808 PPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHP 972
PP G P PP P P P P P P G +HP
Sbjct: 359 PPHQRYHTPGRQDPVDDMSRFIPPASIRPPPMNMHTRPQPMPQQLPSVGATFAHP 413
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +1
Query: 808 PPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHP 972
PP G P PP P P P P P P G +HP
Sbjct: 331 PPHQRYHTPGRQDPVDDMSRFIPPASIRPPPMNMHTRPQPMPQQLPSVGATFAHP 385
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 930 PPXKPPXXPPXXPPXXXPXPXPFS 1001
PP PP PP PP P P S
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPPSS 26
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 930 PPXKPPXXPPXXPPXXXPXPXPFS 1001
PP PP PP PP P P S
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPPSS 26
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -2
Query: 956 GPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXASXGGLFTGXGXWXG 777
G GGF GG G G GG GGG G + GG TG + G
Sbjct: 19 GSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGG--SGFGGGKTGGSGFGG 76
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +1
Query: 808 PPLLAXFPXGSPPPXXXXQXXXPPXXXXPXPDXXXKXPXPXPPXNPPXGPXXSHP 972
PP G P PP P P P P P P G +HP
Sbjct: 263 PPHQRYHTPGRQDPVDDMSRFIPPASIRPPPMNMHTRPQPMPQQLPSVGATFAHP 317
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -2
Query: 956 GPXGGFXGGXGXGXLXXXSGXGXXXXGGXXXWXXXXGGGEPXGKXASXGGLFTGXGXWXG 777
G GGF GG G G GG GGG G + GG TG + G
Sbjct: 19 GSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGG--SGFGGGKTGGSGFGG 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,489,607
Number of Sequences: 27780
Number of extensions: 307210
Number of successful extensions: 1624
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2626021738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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