Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L12
         (1007 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.38 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   8.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.38
 Identities = 19/48 (39%), Positives = 19/48 (39%)
 Frame = +2

Query: 773 PPXPPPGXPXPFXXXXRXPXFPPXGGAGXXPXXPGXXEPPGXGXAAPP 916
           PP PPP  P P          P  G AG  P  P      G G AAPP
Sbjct: 585 PPPPPPMGPPPSPLAGG----PLGGPAGSRPPLPNLL---GFGGAAPP 625


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 17/57 (29%), Positives = 17/57 (29%)
 Frame = -3

Query: 942 GGXXXRXAXGGAAXPXPGGSXXPGXXGXXPAPPXGGKXGQRXXXXKGXGXPGGGXGG 772
           GG     A GG        S   G  G     P  G  G       G G  GG  GG
Sbjct: 815 GGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 8.3
 Identities = 13/43 (30%), Positives = 14/43 (32%)
 Frame = -3

Query: 900 PXPGGSXXPGXXGXXPAPPXGGKXGQRXXXXKGXGXPGGGXGG 772
           P PGG            P  G   G +       G  GGG GG
Sbjct: 495 PPPGGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNGGGGGGGGG 537


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,215
Number of Sequences: 2352
Number of extensions: 7482
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110996730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)