Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L11
(967 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 40 0.004
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 40 0.004
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 38 0.009
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 37 0.028
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 35 0.11
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.26
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 32 0.61
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.80
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 32 0.80
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 2.4
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 2.4
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 30 3.2
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/69 (31%), Positives = 24/69 (34%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPPL P P P+ P PPP P PP +PP P P
Sbjct: 157 PPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPN 216
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 217 APNPPYPPP 225
Score = 33.9 bits (74), Expect = 0.20
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P P P P PPP P P PPP P P
Sbjct: 110 PPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPP-PNPP 168
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 169 PPNAPYPPP 177
Score = 33.5 bits (73), Expect = 0.26
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +1
Query: 739 P*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSP-PP 915
P P P P P P+ P PPP P PP P PP
Sbjct: 135 PPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPP 194
Query: 916 XPXPKXXXXPXPP 954
P P P PP
Sbjct: 195 YPPPPNAPNPPPP 207
Score = 32.7 bits (71), Expect = 0.46
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P P P+ P PPP P PP +PP P P
Sbjct: 175 PPPPYPPPPNPPYPPPPN--PPYPPPPNAPNPPPPNPPYPPP-----PNAPNPPYPPPPN 227
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 228 APNPPYPPP 236
Score = 32.3 bits (70), Expect = 0.61
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 754 PPLIPKXCXXXXPXXPHLXPXXLP-PPXLSXXXDPXPPXXXXGXXRAKXXXSP-PPXPXP 927
PP P P P+ P P PP + P P A P PP P P
Sbjct: 100 PPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPP 159
Query: 928 KXXXXPXPPP 957
P PPP
Sbjct: 160 LYPPPPNPPP 169
Score = 32.3 bits (70), Expect = 0.61
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P P P P PPP +P PP PP P P
Sbjct: 134 PPPNAPYPPSPNAPYPPPPNPPY-PPPLYPPPPNPPPPN---APYPPPPYPPPPNPPYPP 189
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 190 PPNPPYPPP 198
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSP-PPXPXP 927
PPP P P P PPP P PP +P PP P P
Sbjct: 126 PPPNPPYPPPPNAPYPPSPNAPYPPPP-----NPPYPPPLYPPPPNPPPPNAPYPPPPYP 180
Query: 928 KXXXXPXPPP 957
P PPP
Sbjct: 181 PPPNPPYPPP 190
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = +1
Query: 754 PPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKX 933
PP P P P+ P P P P PP P P P
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPP 151
Query: 934 XXXPXPPP 957
P PPP
Sbjct: 152 PNPPYPPP 159
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 39.5 bits (88), Expect = 0.004
Identities = 29/97 (29%), Positives = 32/97 (32%)
Frame = +1
Query: 667 QGPRSXGXTTXIPGSDNHLXXXXXP*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXX 846
+GP S TT P P PPPL P P LPPP L
Sbjct: 286 RGPPSNSFTTQGPPLPPSRDQAPAP---PPPLNATP----PPPPPSRDQVPLPPPPLRGQ 338
Query: 847 XDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PP + PPP P+ P PPP
Sbjct: 339 IAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPP 375
Score = 31.1 bits (67), Expect = 1.4
Identities = 26/97 (26%), Positives = 28/97 (28%)
Frame = +1
Query: 667 QGPRSXGXTTXIPGSDNHLXXXXXP*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXX 846
+GP GS L PPP + P P P PPP
Sbjct: 222 RGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAP---PPPKRGSS 278
Query: 847 XDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PP G PP P P P PPP
Sbjct: 279 NPPPPPTR--GPPSNSFTTQGPPLP-PSRDQAPAPPP 312
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +1
Query: 790 PXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PH PPP P PP G ++ +PPP + P PPP
Sbjct: 195 PPPPHSRHGSAPPPPERSSGPPPPP---PGRGPSQRSLAPPPTGSSR--PLPAPPP 245
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 39.5 bits (88), Expect = 0.004
Identities = 29/97 (29%), Positives = 32/97 (32%)
Frame = +1
Query: 667 QGPRSXGXTTXIPGSDNHLXXXXXP*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXX 846
+GP S TT P P PPPL P P LPPP L
Sbjct: 198 RGPPSNSFTTQGPPLPPSRDQAPAP---PPPLNATP----PPPPPSRDQVPLPPPPLRGQ 250
Query: 847 XDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PP + PPP P+ P PPP
Sbjct: 251 IAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPP 287
Score = 31.1 bits (67), Expect = 1.4
Identities = 26/97 (26%), Positives = 28/97 (28%)
Frame = +1
Query: 667 QGPRSXGXTTXIPGSDNHLXXXXXP*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXX 846
+GP GS L PPP + P P P PPP
Sbjct: 134 RGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAP---PPPKRGSS 190
Query: 847 XDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PP G PP P P P PPP
Sbjct: 191 NPPPPPTR--GPPSNSFTTQGPPLP-PSRDQAPAPPP 224
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +1
Query: 790 PXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PH PPP P PP G ++ +PPP + P PPP
Sbjct: 107 PPPPHSRHGSAPPPPERSSGPPPPP---PGRGPSQRSLAPPPTGSSR--PLPAPPP 157
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 38.3 bits (85), Expect = 0.009
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P P P P PPP P PP PPP P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPP-PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 424 PPPPPPPPP 432
Score = 37.1 bits (82), Expect = 0.021
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P P P P PPP P PP A PPP P P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Query: 931 XXXXPXPPP 957
PP
Sbjct: 433 ALRLACAPP 441
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 36.7 bits (81), Expect = 0.028
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP +P P P PPP L P PP PPP P P
Sbjct: 679 PPPPLPVIEGSSLSVPP---PPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPG 735
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 736 CAGLPPPPP 744
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P P P P PPP + P PP G PPP P P
Sbjct: 697 PPPPPPPLLSGTLPMPP---PPPPPPPGCAGLPPP-PPSPQPG---CAGLPPPPPPPPPG 749
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 750 CAGLPPPPP 758
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 34.7 bits (76), Expect = 0.11
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +1
Query: 745 GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPX 924
G PP P P P PPP P PP PPP P
Sbjct: 312 GSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGA--PPPPSMGMAPPPVGGAAPPPPPPP 369
Query: 925 PKXXXXPXPPP 957
P P PPP
Sbjct: 370 PVGGPPPPPPP 380
Score = 31.9 bits (69), Expect = 0.80
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 823 PPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
PPP S P PP +PPP P P PPP
Sbjct: 287 PPPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPP 331
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +1
Query: 745 GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPX 924
G PPP P P P PPP P PP G + PPP P
Sbjct: 344 GAPPP--PSMGMAPPPVGGAAPPPPPPPPV---GGPPPPPPPIEGRPPSSLGNPPPPPPP 398
Query: 925 PKXXXXPXP 951
+ P P
Sbjct: 399 GRGAPPPGP 407
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.7 bits (76), Expect = 0.11
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P+ P PH P PP L P PP G PPP P
Sbjct: 428 PPP--PQHTGPPQPRPPHGMPQGGGPPQLPPNLPP-PPGGMRGMPPPPMGMYPPPRGFPP 484
Query: 931 XXXXPXPP 954
P PP
Sbjct: 485 PPFGPPPP 492
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 34.7 bits (76), Expect = 0.11
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +1
Query: 745 GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPX 924
G PP P P + P PPP + P PP PPP P
Sbjct: 343 GVNPPPPPTNNPPSPPPPTNNTP---PPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPP 399
Query: 925 PKXXXXPXPPP 957
P P PPP
Sbjct: 400 PTNGPPPPPPP 410
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 33.5 bits (73), Expect = 0.26
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP P P P PPP P PP G PP P P
Sbjct: 921 PPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPP---GGSAPPPGGGAPPLPPPP 977
Query: 931 XXXXPXPPP 957
P PPP
Sbjct: 978 GGSAPPPPP 986
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 739 P*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPX 918
P G PL P P P PPP PP S PP
Sbjct: 925 PPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPP 984
Query: 919 PXPKXXXXPXPPP 957
P P P PPP
Sbjct: 985 PPP---PPPPPPP 994
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 811 PXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PPP P PP G A PPP P P P PPP
Sbjct: 290 PVPPPPPADGSAPAPPPPPPPGG---APPPPPPPPPPPPGDGGAPPPPP 335
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +1
Query: 820 LPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
+PPP + P PP PPP P P PPP
Sbjct: 291 VPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 823 PPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
PPP PP G PPP P P PPP
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 790 PXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P P P P ++ P PP SPPP P P PPP
Sbjct: 87 PLVPAGVEAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPP 142
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 790 PXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P P P PPP P PP A PPP P P PPP
Sbjct: 117 PETPSQAPSPPPPPTSPATRAPPPPPPIAP---ATGGPPPPPPIAPATGGPPPPPP 169
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
Frame = +1
Query: 754 PPLIPKXCXXXXPXX---PHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPX 924
PPL+P P + P PPP P A PPP
Sbjct: 86 PPLVPAGVEAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIA 145
Query: 925 PKXXXXPXPPP 957
P P PPP
Sbjct: 146 PATGGPPPPPP 156
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPK 930
PPP I P P +P P + PP G PPP P P
Sbjct: 153 PPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPS--GGPPPPPPPPPPPPPPPI 210
Query: 931 XXXXPXPPP 957
PPP
Sbjct: 211 LELAAPPPP 219
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +1
Query: 751 PPPLIPKXCXXXXPXXPHLXPXXLPPPXL-SXXXDPXPPXXXXGXXRAKXXXSPPPXP 921
PPP P P P P PPP P PP A+ PPP P
Sbjct: 52 PPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAP 109
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +1
Query: 790 PXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P P P PPP + P P +PPP P P PP
Sbjct: 55 PSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPP 110
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 31.9 bits (69), Expect = 0.80
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = +1
Query: 712 DNHLXXXXXP*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRA 891
D HL G PP IP P P P P S P PP
Sbjct: 257 DKHLASSSSK-GHPP--IPSASQNATPPPPPPPPSNTPGMFASSGFQPPPPPPTD----- 308
Query: 892 KXXXSPPPXPXPKXXXXPXPPP 957
PPP P P P PPP
Sbjct: 309 --FAPPPPPPEPTSELPPPPPP 328
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 956 GGGXGXXLXFGXGXGGGEXXXXARXXPXXXXGGXGSXXXESXGGGRXXGXR*GXSG 789
GGG G G G GGG G G GGGR G G G
Sbjct: 136 GGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGRGTGGGSRG 191
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 853 PXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
P PP +A PPP P P P PPP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPP 694
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +1
Query: 823 PPPXLSXXXDPXPPXXXXGXXRAKXXXSPPP-XPXPKXXXXPXPPP 957
PPP P PP + PPP P P P PPP
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPP 250
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 790 PXXPHLXPXXLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXP 921
P P P PPP S P PP A PPP P
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIP 252
Score = 29.1 bits (62), Expect = 5.6
Identities = 22/88 (25%), Positives = 24/88 (27%), Gaps = 1/88 (1%)
Frame = +1
Query: 694 TXIPGSDNHLXXXXXP*GXPPPLIPKXCXXXXPXXPHLXPXXLPPPXLSXXXDPXPPXXX 873
T +PG+ G P P P P P PPP P PP
Sbjct: 174 TRLPGNARVNAIDQISIGTSHPTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPP 233
Query: 874 X-GXXRAKXXXSPPPXPXPKXXXXPXPP 954
R P P P P PP
Sbjct: 234 PPSPPRPLAAKLPEPPPIPNMPPTLPPP 261
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Frame = +1
Query: 790 PXXPHLXPX-XLPPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXP---XPKXXXXPXPPP 957
P PH P +PPP + PP G PPP P P P PPP
Sbjct: 241 PPPPHSMPPPGMPPPGMMPPPG-FPPMGMPGMGGMPPPGMPPPMPPGGMPPNMEQPPPPP 299
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 823 PPPXLSXXXDPXPPXXXXGXXRAKXXXSPPPXPXPKXXXXPXPPP 957
PPP L+ P P G A +PPP P P P PPP
Sbjct: 282 PPPPLTGGMLPPP---FGGHPAA----APPPPPLPAGVPAPPPPP 319
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,539,509
Number of Sequences: 59808
Number of extensions: 314311
Number of successful extensions: 1212
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2848211039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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