Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L09
(938 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.097
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 32 0.58
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 31 1.0
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 30 2.4
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 2.4
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 2.4
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 29 5.4
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 29 5.4
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 29 5.4
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 5.4
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 9.5
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect(2) = 0.097
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 102 PPPPPPPPPPPPPPPPPP 119
Score = 29.1 bits (62), Expect(2) = 0.80
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 103 PPPPPPPPPPPPPPPPPP 120
Score = 24.6 bits (51), Expect(2) = 0.097
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 139 PPPPPPPPAPCMP 151
Score = 21.4 bits (43), Expect(2) = 0.80
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
P PP PPP P
Sbjct: 136 PAPPPPPPPPPAP 148
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 32.3 bits (70), Expect = 0.58
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P G PPP PPPP PPP
Sbjct: 294 PPPADGSAPAPPPPPPPGGAPPPPPPPPPPPP 325
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P G PPP PPPP PPP
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPPPPP 323
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P G PPP PPP PPP
Sbjct: 306 PPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +2
Query: 821 PXPGXG--WGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
P PG WG PPP PPP PPP P
Sbjct: 199 PYPGQPGMWGPPPMGGPPPMGGPPGGYPPPPPPPGAGDP 237
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 830 GXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
G G PPP PPPP PPP P
Sbjct: 459 GVGQAPPPPPPPPPPPPPPPPPPPPPPPPFPPPP 492
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 474 PPPPPPPPPPPPPPFPPPPPPTP 496
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTP 706
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 683 PPPPPPPPPPPPPPPPPP 700
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 1164 PPPPPSSPSPPPPPPPPPPPPTP 1186
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 1163 PPPPPPSSPSPPPPPPPP 1180
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 653 PPPPPGGGMFPPPPPPPPGGGVP 675
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPP 913
P P G G+ PPP PP P PP
Sbjct: 653 PPPPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 305 PPPLPAGVPAPPPPPPPPMLGGP 327
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPP 390
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPP 391
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPP 392
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPP 396
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPP 402
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPP 407
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPP 411
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPP 412
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPP 413
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPP 417
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPP 418
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAP 420
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 399 PPPPPPPPPPPPPPPPPPPPAPP 421
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 400 PPPPPPPPPPPPPPPPPPPAPPP 422
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPP 423
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 405 PPPPPPPPPPPPPPAPPPPPPPP 427
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 410 PPPPPPPPPAPPPPPPPPPPPPP 432
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 842 GVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
G+ PPP PPP PPP P
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSP 389
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPP 227
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 830 GXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
G G G P P PPPP PPP P
Sbjct: 849 GRGRGRSRYRRPRPRPRRPPPPPPPPPPPPPPPP 882
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 867 PPPPPPPPPPPPPPPPPP 884
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 868 PPPPPPPPPPPPPPPPPP 885
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 73 PPPLCAPPPPPPPPPPPP 90
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 54 PPPPPPPPPPPPPPPPPP 71
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 827 PGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P G G PP PPPP PPP
Sbjct: 964 PPPGGGAPPLPPPPGGSAPPPPPPPPPPPP 993
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPP-PXXXXXXXPPPPXPPPXXXXP 931
P PG PP P PPPP PPP P
Sbjct: 957 PPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 274 PPPLCAPPPPPPPPPPPP 291
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 424 PPPPPPPAPLPPPPPPPP 441
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 908 PPPPLPLAPEPPPPLPPP 925
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 200 PPPLDDLDDLPPPPPPPP 217
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 188 PPPPSGGPPPPPPPPPPP 205
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 189 PPPSGGPPPPPPPPPPPP 206
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P G P P PPPP PPP
Sbjct: 716 PPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPP 747
Score = 25.4 bits (53), Expect(2) = 9.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPP PPP
Sbjct: 701 PPPLLSGTLPMPPPPPPP 718
Score = 21.0 bits (42), Expect(2) = 9.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PP P
Sbjct: 714 PPPPPPPGCAGLP 726
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,161,057
Number of Sequences: 59808
Number of extensions: 367615
Number of successful extensions: 2516
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2740956230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -