Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L09
(938 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 26 0.66
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.90
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.90
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.90
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 25 1.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 1.2
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 31 1.6
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 26 4.2
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 26 4.2
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 25 4.4
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 25 4.4
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.3
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 25 7.3
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 28 8.4
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 28 8.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 8.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 25 9.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 25 9.6
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 25.8 bits (54), Expect(2) = 0.66
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPP PPP
Sbjct: 73 PPPLISILQQAPPPPPPP 90
Score = 25.0 bits (52), Expect(2) = 8.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 74 PPLISILQQAPPPPPPPP 91
Score = 24.6 bits (51), Expect(2) = 0.66
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 86 PPPPPPPPTLKAP 98
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PP P
Sbjct: 87 PPPPPPPTLKAPP 99
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P PG + PPP PPPP PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P G PPP PPPP PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
P P G PPP PPPP PPP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPP-PPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P PG + PPP PPPP PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P G PPP PPPP PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
P P G PPP PPPP PPP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPP-PPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P PG + PPP PPPP PPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P G PPP PPPP PPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
P P G PPP PPPP PPP P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPP-PPPGMFAP 378
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 25.0 bits (52), Expect(2) = 1.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 349 PPIISPPAPPPPPPPPPP 366
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 361 PPPPPPPPPPQTP 373
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 916 GGXXGGGGXGXXXXGGXXXXXXXXXPPXPRXGKXKGG 806
GG GGGG G GG PP P G GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGG 62
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 916 GGXXGGGGXGXXXXGGXXXXXXXXXPPXPRXGKXKGG 806
GG GGGG G GG PP P G GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGG 62
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Frame = +2
Query: 812 FXFPXPGXGWG------VXXXXXPPPXXXXXXXPPPPXPPP 916
F FP G G G PPP PPPP PPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 43 PPPMCGCAPPPPPPPPPP 60
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 381 YILKLTSRLNNTSIYGVCLKDHFPIALAEPRTSIAGPALTMP 256
++L L+ L S Y + +K HFP TS+ GPA+ +P
Sbjct: 612 HLLNLSHHLCRFSEYNLFVKAHFPRGSYGSLTSMTGPAVEIP 653
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 26.2 bits (55), Expect(2) = 4.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 258 PPREKSVPPPPPPPPPP 274
Score = 25.8 bits (54), Expect(2) = 4.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPPP PPP
Sbjct: 256 PEPPREKSVPPPPPPPPP 273
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 896 PPPXPPPXXXXP 931
PPP PPP P
Sbjct: 265 PPPPPPPPPPKP 276
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP P P P
Sbjct: 269 PPPPPPKPVSREP 281
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 26.2 bits (55), Expect(2) = 4.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 258 PPREKSVPPPPPPPPPP 274
Score = 25.8 bits (54), Expect(2) = 4.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPPP PPP
Sbjct: 256 PEPPREKSVPPPPPPPPP 273
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 896 PPPXPPPXXXXP 931
PPP PPP P
Sbjct: 265 PPPPPPPPPPKP 276
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP P P P
Sbjct: 269 PPPPPPKPVSREP 281
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 26.2 bits (55), Expect(2) = 4.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 243 PPREKSVPPPPPPPPPP 259
Score = 25.8 bits (54), Expect(2) = 4.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPPP PPP
Sbjct: 241 PEPPREKSVPPPPPPPPP 258
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 896 PPPXPPPXXXXP 931
PPP PPP P
Sbjct: 250 PPPPPPPPPPKP 261
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP P P P
Sbjct: 254 PPPPPPKPVSREP 266
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 26.2 bits (55), Expect(2) = 4.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 243 PPREKSVPPPPPPPPPP 259
Score = 25.8 bits (54), Expect(2) = 4.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPPP PPP
Sbjct: 241 PEPPREKSVPPPPPPPPP 258
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 896 PPPXPPPXXXXP 931
PPP PPP P
Sbjct: 250 PPPPPPPPPPKP 261
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP P P P
Sbjct: 254 PPPPPPKPVSREP 266
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 186 PPPPIPPPGPPPP 198
Score = 23.0 bits (47), Expect(2) = 4.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP P PP PPP
Sbjct: 173 PPHCECENCPKPPPPPP 189
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 186 PPPPIPPPGPPPP 198
Score = 23.0 bits (47), Expect(2) = 4.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP P PP PPP
Sbjct: 173 PPHCECENCPKPPPPPP 189
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 777 PPPFFALPVPPPPPVPPP 794
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 930 GXXXXGGGXGGGGXXXXXXXGGGXXXXXTPHPXPGXG 820
G GG GGGG GGG P P PG G
Sbjct: 90 GGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGP-PGPG 125
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 818 FPXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
FP P WG PPP PPP PPP P
Sbjct: 31 FPGPLRPWG------PPPPWHRNRGPPPFGPPPPWDRP 62
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 664 PPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 664 PPPGGLGGFMPPPPPPPP 681
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 1346 PPPSDDLTPVPPPPPPPP 1363
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 579 PPPPPPMLGGPPPPPPPP 596
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 613 GXGXPPXRGGLXGPPXXTKIXXXXGPPPH 699
G G PP GG+ GPP GPP H
Sbjct: 170 GMGGPPGHGGMGGPPGH---GGQGGPPGH 195
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 613 GXGXPPXRGGLXGPPXXTKIXXXXGPPPH 699
G G PP GG+ GPP GPP H
Sbjct: 450 GMGGPPGHGGMGGPPGH---GGQGGPPGH 475
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 24.6 bits (51), Expect(2) = 7.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 132 PPPPPPPPHYPPP 144
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP P P PPP
Sbjct: 97 PPPAPYPQHAVPAPAPPP 114
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P + PP PPPP PPP
Sbjct: 768 PKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPP 799
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P + PP PPPP PPP
Sbjct: 667 PKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPP 698
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 24.6 bits (51), Expect(2) = 8.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 766 PPPPPPPPPHCEP 778
Score = 21.8 bits (44), Expect(2) = 8.7
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPP PPP
Sbjct: 754 PQPIQQQQSSIPPPPPPP 771
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 24.6 bits (51), Expect(2) = 8.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 766 PPPPPPPPPHCEP 778
Score = 21.8 bits (44), Expect(2) = 8.7
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPP PPP
Sbjct: 754 PQPIQQQQSSIPPPPPPP 771
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 24.6 bits (51), Expect(2) = 9.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 155 PPPPPPPPPVSVP 167
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPP P P
Sbjct: 113 PPPTASSAPPVPPPAPVP 130
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 24.6 bits (51), Expect(2) = 9.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 155 PPPPPPPPPVSVP 167
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPP P P
Sbjct: 113 PPPTASSAPPVPPPAPVP 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,100,196
Number of Sequences: 27780
Number of extensions: 325497
Number of successful extensions: 2689
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2051
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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