Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L09
(938 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 32 0.48
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 29 0.49
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 26 0.49
At5g46780.2 68418.m05763 VQ motif-containing protein contains PF... 26 0.68
At5g46780.1 68418.m05762 VQ motif-containing protein contains PF... 26 0.68
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 29 0.84
At1g61080.1 68414.m06877 proline-rich family protein 30 1.0
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 1.9
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 30 1.9
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 30 1.9
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 29 3.4
At3g26120.1 68416.m03257 RNA-binding protein, putative similar t... 25 3.9
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 4.4
At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family... 29 4.4
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 29 4.4
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 29 4.4
At4g33660.1 68417.m04781 expressed protein 29 4.4
At4g18570.1 68417.m02749 proline-rich family protein common fami... 29 4.4
At3g50180.1 68416.m05486 hypothetical protein 29 4.4
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 4.4
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 26 4.9
At3g51290.1 68416.m05614 proline-rich family protein 25 5.1
At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family... 23 6.6
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 28 7.8
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 25 8.6
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 32.3 bits (70), Expect = 0.48
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 818 FPXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
+P +G PPP PPPP PPP P
Sbjct: 365 YPIDCASFGCSPPSPPPPPPPPPPPPPPPPPPPPPPPP 402
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 381 PPPPPPPPPPPPPPPPPPPPPPP 403
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 382 PPPPPPPPPPPPPPPPPPPPPPP 404
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 383 PPPPPPPPPPPPPPPPPPPPPPP 405
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 384 PPPPPPPPPPPPPPPPPPPPPPP 406
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 385 PPPPPPPPPPPPPPPPPPPPPPP 407
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 389 PPPPPPPPPPPPPPPPPPPYVYP 411
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 405 PPPYVYPSPPPPPPSPPPYVYPP 427
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 29.1 bits (62), Expect(2) = 0.49
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 36 PPPSHQPYSYPPPPPPPP 53
Score = 25.0 bits (52), Expect(2) = 8.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPP PPP
Sbjct: 35 PPPPSHQPYSYPPPPPPP 52
Score = 21.8 bits (44), Expect(2) = 0.49
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 896 PPPXPPPXXXXP 931
PPP PPP P
Sbjct: 72 PPPPPPPSAPPP 83
Score = 21.4 bits (43), Expect(2) = 8.5
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPP PPP P
Sbjct: 76 PPPSAPPPLVPDP 88
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 26.2 bits (55), Expect(2) = 0.49
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 244 PPQQPPATPPPPPPPPP 260
Score = 24.6 bits (51), Expect(2) = 0.49
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 252 PPPPPPPPPVEVP 264
>At5g46780.2 68418.m05763 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 25.8 bits (54), Expect(2) = 0.68
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPPP PPP
Sbjct: 92 PAPLTQLNHPPPPPPPPP 109
Score = 24.6 bits (51), Expect(2) = 0.68
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 103 PPPPPPPPVQSVP 115
>At5g46780.1 68418.m05762 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 25.8 bits (54), Expect(2) = 0.68
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
P P PPPP PPP
Sbjct: 92 PAPLTQLNHPPPPPPPPP 109
Score = 24.6 bits (51), Expect(2) = 0.68
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 103 PPPPPPPPVQSVP 115
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 29.1 bits (62), Expect(2) = 0.84
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 46 PPPPLMRRRAPPPPPPPP 63
Score = 21.0 bits (42), Expect(2) = 0.84
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP P P P
Sbjct: 60 PPPPLPRPCSRPP 72
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
P P G PPP PPPP PP P
Sbjct: 539 PPPPPGTAAAPPPPPPPPGTQAAPPPPPPPPMQNRAP 575
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P + PPP PPPP PPP
Sbjct: 512 PPPPLPTTIAAPPPPPPPPRAAVAPPPPPPPP 543
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
P P V PPP PPPP PP P
Sbjct: 526 PPPPPRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAP 562
Score = 25.0 bits (52), Expect(2) = 1.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 444 PPIADIAISMPPPPPPPP 461
Score = 24.6 bits (51), Expect(2) = 1.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 456 PPPPPPPPPAVMP 468
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P V PPP PPPP PPP
Sbjct: 427 PPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPP 458
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 444 PPPPVYSPPPPPPPPPPPPVYSP 466
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 445 PPPVYSPPPPPPPPPPPPVYSPP 467
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 456 PPPPPPPVYSPPPPPPPPPPPPP 478
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 460 PPPVYSPPPPPPPPPPPPPVYSP 482
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 490 PPPPVYSPPPPPPPPPPPPVYSP 512
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 491 PPPVYSPPPPPPPPPPPPVYSPP 513
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P + PPP PPPP PPP
Sbjct: 443 PPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPP 474
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P + PPP PPPP PPP
Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPP 489
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPP 916
P P + PPP PPPP PPP
Sbjct: 474 PPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPP 505
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 442 PPPPPPVYSPPPPPPPPP 459
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 489 PPPPPVYSPPPPPPPPPP 506
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 67 PPPTSPPPPSPPPPSPPPPSPPP 89
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 72 PPPPSPPPPSPPPPSPPPPSPPP 94
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPPXXXXP 931
PPP PPPP PPP P
Sbjct: 42 PPPPPPPPPPPPPPPPPPPPPPP 64
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 619 GXPPXRGGLXGPPXXTKIXXXXGPPPH 699
G PP R + GPP I PPPH
Sbjct: 240 GPPPQRPPMGGPPPPPHIGGSAPPPPH 266
>At3g26120.1 68416.m03257 RNA-binding protein, putative similar to
GB:AAC39463 from [Zea mays], PF00076 RNA recognition
motif (2 copies)
Length = 615
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 74 PPPPQPPPPPPRP 86
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPP PPP
Sbjct: 66 PPHPMMFSPPPPQPPPP 82
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 1111 PPPPLSPPPSPPPPPPPP 1128
>At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 302
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 104 PPPQPLNLFSPPPPPPPP 121
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 39 PPPVYSPPISPPPPPPPP 56
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 640 PPPPSMSGGAPPPPPPPP 657
>At4g33660.1 68417.m04781 expressed protein
Length = 76
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 812 FXFPXPGXGWGVXXXXXPPPXXXXXXXPPPPXPPPXXXXP 931
+ +P P G PP PPPP PPP P
Sbjct: 6 YAYPYPAPG-NYPQGPPPPVGVPPQYYPPPPPPPPPPPPP 44
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 324 PPPPPSVSKAPPPPPPPP 341
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 325 PPPPSVSKAPPPPPPPPP 342
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 326 PPPSVSKAPPPPPPPPPP 343
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 25 PPPQPPPPPPPPPPPPPP 42
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP PPPP PPP
Sbjct: 514 PPPYVYSSPPPPPPSPPP 531
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 26.2 bits (55), Expect(2) = 4.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPPP PPP
Sbjct: 15 PPMRGRVPLPPPPPPPP 31
Score = 21.0 bits (42), Expect(2) = 4.9
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PP P
Sbjct: 27 PPPPPPPMRRRAP 39
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PPP P
Sbjct: 105 PPPPPPPPPPPPP 117
Score = 22.6 bits (46), Expect(2) = 5.1
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPPP 916
PP PPP PPP
Sbjct: 68 PPSPSPPPPPPPRPPPP 84
>At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 561
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 866 PPXXXXXXXPPPPXPP 913
PP PPPP PP
Sbjct: 359 PPLVYSPPPPPPPPPP 374
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 893 PPPPXPPP 916
PPPP PPP
Sbjct: 394 PPPPPPPP 401
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 818 FPXPGXGWGVXXXXXPPPXXXXXXXPPPPXPP 913
+P P + PPP PPPP PP
Sbjct: 593 YPSPSPPYYQYTSSPPPPTYYATQSPPPPPPP 624
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 25.0 bits (52), Expect(2) = 8.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 863 PPPXXXXXXXPPPPXPPP 916
PPP P PP PPP
Sbjct: 14 PPPPRLLVLPPLPPPPPP 31
Score = 21.4 bits (43), Expect(2) = 8.6
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 893 PPPPXPPPXXXXP 931
PPPP PP P
Sbjct: 28 PPPPPPPQLPFGP 40
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,000,331
Number of Sequences: 28952
Number of extensions: 297568
Number of successful extensions: 3435
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2344
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2246578488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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