Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L08
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 33 0.29
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.29
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 8.3
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 8.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.3
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 100 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 189
L LC LLA SA YY S + PY++Y P
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 680 PXXPPXPXPKXLXKXHPPXPXXXXQKXXPXXPCPTPXXXXGP 805
P PP P P+ L PP P P P P P GP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 298 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 146
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 298 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 146
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 298 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 146
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 298 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 146
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/75 (24%), Positives = 18/75 (24%)
Frame = +2
Query: 677 PPXXPPXPXPKXLXKXHPPXPXXXXQKXXPXXPCPTPXXXXGPTXXXXXQXXXFXXXXXP 856
PP PP P PP P P P P P F P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 857 XXPXXXXXPXXPXXP 901
P P P P
Sbjct: 787 PPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/75 (24%), Positives = 18/75 (24%)
Frame = +2
Query: 677 PPXXPPXPXPKXLXKXHPPXPXXXXQKXXPXXPCPTPXXXXGPTXXXXXQXXXFXXXXXP 856
PP PP P PP P P P P P F P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 857 XXPXXXXXPXXPXXP 901
P P P P
Sbjct: 787 PPPPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/75 (24%), Positives = 18/75 (24%)
Frame = +2
Query: 677 PPXXPPXPXPKXLXKXHPPXPXXXXQKXXPXXPCPTPXXXXGPTXXXXXQXXXFXXXXXP 856
PP PP P PP P P P P P F P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 857 XXPXXXXXPXXPXXP 901
P P P P
Sbjct: 370 PPPPGMFAPMAPVIP 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,746,595
Number of Sequences: 27780
Number of extensions: 298133
Number of successful extensions: 885
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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