Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L07
(944 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.005
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.005
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.24
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.72
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 5.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 5.1
SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 ... 27 5.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.9
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.5 bits (93), Expect = 2e-04
Identities = 33/126 (26%), Positives = 36/126 (28%), Gaps = 8/126 (6%)
Frame = +3
Query: 591 PXVPE----APSTPTXLSXXPPXSXPRXXXPLQPFXXXLXXXXXXXXXXXXXXXFXPXPP 758
P VP+ AP P PP P P+ PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 759 XPXPXXSXPFXXPX--GPXPPXPPXXXPPXXXXXPXXXPPXPP--APPXPXXXXXXXPPP 926
P P + P P P P P PP P PP APP P P P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Query: 927 PPXXXP 944
PP P
Sbjct: 1212 PPSTAP 1217
Score = 39.5 bits (88), Expect = 7e-04
Identities = 30/118 (25%), Positives = 31/118 (26%), Gaps = 4/118 (3%)
Frame = +3
Query: 591 PXVPEAPSTPTXLSXXPPXSXPRXXXPLQPFXXXLXXXXXXXXXXXXXXXFXPXPPXPXP 770
P AP P PP P P+ PP P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 771 XXSXP-FXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPP---APPXPXXXXXXXPPPPP 932
P P PP PP P PP PP APP P P P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 35.1 bits (77), Expect = 0.015
Identities = 30/118 (25%), Positives = 34/118 (28%), Gaps = 8/118 (6%)
Frame = +3
Query: 567 LPDXXXXGPXVPE---APSTPTXLSXXPPXSXPRXXXPL-QPFXXXLXXXXXXXXXXXXX 734
+P P VP AP P PP P P+ +P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Query: 735 XXFXPXPPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXP----PAPPXP 896
PP P P + P P PP PP P PP P APP P
Sbjct: 1183 KPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 33.9 bits (74), Expect = 0.034
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPP---APPXPXXXXXXXPP 923
P P P + P P G P P P PP P APP P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV 1133
Query: 924 PPPXXXP 944
P P P
Sbjct: 1134 PVPSGAP 1140
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 3/67 (4%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP-- 926
PP P P P PP P P P PP P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 927 -PPXXXP 944
PP P
Sbjct: 1082 APPVPAP 1088
Score = 30.7 bits (66), Expect = 0.31
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPX--GPXPPXPPXXXPPXXXXXPXXXPPXP----PAPPXPXXXXXX 914
PP P P P P P P P PP P PP P APP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP--VPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 915 XPPPPPXXXP 944
P P P
Sbjct: 1141 PVPKPSVAAP 1150
Score = 29.5 bits (63), Expect = 0.72
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 8/72 (11%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXP-------PXPPXXXP-PXXXXXPXXXPPXPPAPPXPXXXX 908
PP P P P P P P P P P P P APP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 909 XXXPPPPPXXXP 944
P P P P
Sbjct: 1110 AVPPVPAPSGAP 1121
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXPPXP-PXXXPPXXXXXPXXXPPXP-PAPPXPXXXXXXXPPP 926
PP P P P P PP P P P PP P P+ P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Query: 927 PP 932
P
Sbjct: 1258 SP 1259
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXP-PAPPXPXXXXXXXPP 923
P P P P P P P P P P PP P P+ P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTP-PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Query: 924 PPP 932
P P
Sbjct: 1084 PVP 1086
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXP-PXPPAPPXPXXXXXXXPPPP 929
PP P S P P P P PP P P P A P PP P
Sbjct: 986 PPKDHPP-SAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Score = 26.6 bits (56), Expect = 5.1
Identities = 33/135 (24%), Positives = 40/135 (29%), Gaps = 9/135 (6%)
Frame = +2
Query: 500 PKTKPAESLLXVYPRVGXPQXXPSXSXPXRTXRT*SSLHPNP-PFXXXPPLXSPGXXPPS 676
P KP+ ++ V G P P S S P P P PP+ +P PP
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPV-PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 677 TLXXXXXXXXXXXLSXXPPXXXXPP--------SPPPXPXXFXXLXPPXWPXPPXPPXXX 832
P PP P P P + P PP PP
Sbjct: 1162 PKPSVAAPPVPA------PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Query: 833 APXXXXXXPXXPPLP 877
AP PP+P
Sbjct: 1216 APPVPTPSAGLPPVP 1230
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP 926
P P P P P P P PP P P PP P P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP-PSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Query: 927 PP 932
P
Sbjct: 1241 AP 1242
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +2
Query: 749 PSPPPXPXXFXXLXPPXWPXPPXPPXXXAPXXXXXXPXXPPLPXGXPXXXXXXXXXPPPP 928
P+PP P PP P AP P PPLP G P P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 929 P 931
P
Sbjct: 478 P 478
Score = 37.9 bits (84), Expect = 0.002
Identities = 31/126 (24%), Positives = 33/126 (26%)
Frame = +3
Query: 567 LPDXXXXGPXVPEAPSTPTXLSXXPPXSXPRXXXPLQPFXXXLXXXXXXXXXXXXXXXFX 746
LP P P S P+ PP S R +
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRT 412
Query: 747 PXPPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP 926
PP P P P P PP P P P P P APP P P P
Sbjct: 413 STPPVPTPPSLPPSAPPS--LPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 927 PPXXXP 944
P P
Sbjct: 471 PAAPAP 476
Score = 33.9 bits (74), Expect = 0.034
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPPP 929
PP P S P P P P PP P PP PPA P P P P
Sbjct: 432 PPSAPP--SLPMGAPAAPPLPPSAPIAPPLPAGMPAA-PPLPPAAPAPPPAPAPAPAAP 487
Score = 31.1 bits (67), Expect = 0.24
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPX-PPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPP 923
P P P + P P PP PP P P P PP PP PP
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSA--PIAPPLPAGMPAAPPLPP-----AAPAPP 477
Query: 924 PPPXXXP 944
P P P
Sbjct: 478 PAPAPAP 484
Score = 29.1 bits (62), Expect = 0.95
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 8/67 (11%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXG--------PXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXX 908
PP P P P G P PP PP P PP PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 909 XXXPPPP 929
PPP
Sbjct: 372 TGRQPPP 378
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 804 PXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPPPP 932
P PP P PP P P PP P P PP P
Sbjct: 231 PIPPSIPSSRPP--ERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPXPPXPPXXXPP-XXXXXPXXXPPXPPAP--PXPXXXXXXX 917
P PP P P P P PP P P PP P AP P
Sbjct: 231 PIPPS-IPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 918 PPPPP 932
PP PP
Sbjct: 290 PPLPP 294
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +2
Query: 749 PSPPPXPXXFXXLX--PPXWPXPPXPPXXXAP--XXXXXXPXXPPLPXGXPXXXXXXXXX 916
P+PPP P PP P P P P P PP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 917 PPPPP 931
PPPPP
Sbjct: 311 PPPPP 315
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 13/60 (21%)
Frame = +3
Query: 804 PXPPXPPXXX----PPXXXXXPXXXPPXPPAP---------PXPXXXXXXXPPPPPXXXP 944
P PP PP PP P PP P P P PPPPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 748 PXPPXLPXXFPXPXXXXLAPXPXXPXXPXPP 840
P PP P P P AP P P P PP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAP-PLPPAAPAPP 477
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = +3
Query: 810 PPXPPXXXPPXXXXXPXXXPPX------PPAPPXPXXXXXXXPPPPPXXXP 944
PP PP P P PP PP PP P PPPPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXP 896
P PP P P P PP P PP P PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPPPP 932
PP P P P P P P PP PP PP PP PPPPP
Sbjct: 732 PPPPPPAVIVPTPAP-APIPVPPPAPI--------MGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +2
Query: 647 LXSPGXXPPSTLXXXXXXXXXXXLSXXPPXXXXPPSPPPXPXXFXXLXPPXWPXPP 814
L SP PP+ + + P PP PPP P PP P PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.72
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 756 PXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPPPPX 935
P P P P G PP PP PP PP PP PP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPP---PPGVAG--AGPPPPPPPPPAVSAGGSRYYAPAPQ 798
Query: 936 XXP 944
P
Sbjct: 799 AEP 801
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +2
Query: 728 PPXXXXPPSPPPXPXXFXXLXPPXWPXPPXPPXXXAPXXXXXXPXXPP 871
PP P+P P P P PP PP P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXP 896
P PP P P + G PP PP P P P A P P
Sbjct: 761 PPPPPPPPGVA-------GAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 795 PXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPPPP 932
P P PP P P PP P APP P PPP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 804 PXPPXPPXXXPPXXXXXPXXX-PPXPPAPPXPXXXXXXXPPP 926
P PP PP PP P PP P PP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Frame = +3
Query: 810 PPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP--PPXXXP 944
PP P P P PP PP P PP PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 762 PXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPPP 929
P S P P PP PP P PP P P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP----PSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 855 PXXXPPXPPAPPXPXXXXXXXPPPPPXXXP 944
P PP P P PPPPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVP 1715
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.7 bits (81), Expect = 0.005
Identities = 32/104 (30%), Positives = 32/104 (30%)
Frame = -3
Query: 924 GGGXXXXXXXXXGXPXGRGGXXGXXXXXXGAXXXGGXGGXGQXGGXRXWKXXGXGGGXGG 745
GGG G P G GG G GG GG G G G GGG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 744 KXXXGGXXEXXXXXXXXXXXXRVEGGXXPGEXXGGXXXKGGLGW 613
GG G PG GG GG GW
Sbjct: 247 ---FGGGLGGF--------------GGGPGGFGGGPGGHGGPGW 273
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -2
Query: 943 GXXXGGGGGXXXXXXXGXGGAGGXGGXXXGXXXXXGGXXXGGXGGXGPXG 794
G GG GG GG GG GG G GG GG GG G G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG-GGPGGHGGPG 272
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/68 (33%), Positives = 24/68 (35%)
Frame = -3
Query: 930 GGGGGXXXXXXXXXGXPXGRGGXXGXXXXXXGAXXXGGXGGXGQXGGXRXWKXXGXGGGX 751
G GG G GRGG G G G GG G GG R G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG----GRGGSS 61
Query: 750 GGKXXXGG 727
GG+ G
Sbjct: 62 GGRGGAKG 69
Score = 32.7 bits (71), Expect = 0.077
Identities = 23/62 (37%), Positives = 23/62 (37%)
Frame = -3
Query: 930 GGGGGXXXXXXXXXGXPXGRGGXXGXXXXXXGAXXXGGXGGXGQXGGXRXWKXXGXGGGX 751
G GG G GRGG G GA GG GG G G R G GG
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARG--GGRGGA--RGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 750 GG 745
GG
Sbjct: 69 GG 70
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 943 GXXXGGGGGXXXXXXXGXGGAGGXGGXXXGXXXXXGGXXXGGXGGXG 803
G G GGG G GGA G G G GG G G G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPX--PPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP 926
PP P P P P PP P PP P PP P+ P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 927 PP 932
PP
Sbjct: 204 PP 205
Score = 33.5 bits (73), Expect = 0.044
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 10/76 (13%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPX-PPXPPXXXPPXXXXXPXXX----PPXPPA-----PPXP 896
P PP P P P P PP P PP P PP PA PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 897 XXXXXXXPPPPPXXXP 944
PP PP P
Sbjct: 188 PSLPSAVPPMPPKVPP 203
Score = 30.3 bits (65), Expect = 0.41
Identities = 23/89 (25%), Positives = 25/89 (28%)
Frame = +2
Query: 605 SSLHPNPPFXXXPPLXSPGXXPPSTLXXXXXXXXXXXLSXXPPXXXXPPSPPPXPXXFXX 784
SS PP PP PP++ S P PP P P
Sbjct: 118 SSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP----- 172
Query: 785 LXPPXWPXPPXPPXXXAPXXXXXXPXXPP 871
PP P P AP P PP
Sbjct: 173 --PPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/61 (27%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Frame = +3
Query: 753 PPXPXPXXSXPFXXPXGPXPPXP--PXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP 926
P P P P PP P P P P PP P + P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 927 P 929
P
Sbjct: 185 P 185
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/80 (26%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Frame = +2
Query: 617 PNPPFXXXPPLXSP---GXXPPSTLXXXXXXXXXXXLSXXPPXXXXPPSP---PPXPXXF 778
P P PP +P PPS + P P +P PP
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Query: 779 XXLXPPXWPXPPXPPXXXAP 838
PP P P PP AP
Sbjct: 191 PSAVPPMPPKVPPPPLSQAP 210
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 6/56 (10%)
Frame = +3
Query: 795 PXGPXPPXP------PXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPPPPXXXP 944
P P PP P P PP P PP P PPP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 746 PPSPPPXPXXFXXLXPPXWPXPPXPP 823
PP PP P PP P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 855 PXXXPPXPPAPPXPXXXXXXXPPPPP 932
P PP PP PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 810 PPXPPXXXPPXXXXXPXXXPPXPPAP 887
PP P PP P PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 822 PXXXPPXXXXXPXXXPPXPPAPPXP 896
P PP P PP P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 23.0 bits (47), Expect(2) = 2.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 728 PPXXXXPPSPPPXP 769
PP PPS PP P
Sbjct: 14 PPPGFEPPSQPPPP 27
Score = 22.6 bits (46), Expect(2) = 2.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 623 PPFXXXPPLXSPGXXPPS 676
PP PP PG PPS
Sbjct: 5 PPGNPPPPPPPPGFEPPS 22
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.72
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -3
Query: 882 PXGRGGXXGXXXXXXGAXXXGGXGGXGQXGGXRXWKXXGXGGGXGGKXXXG 730
P GRGG G G+ GG GG + GG G GGG G G
Sbjct: 134 PAGRGGRGGFRGGRGGS--RGGFGGNSR-GGFGGGSRGGFGGGSRGGSRGG 181
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -3
Query: 888 GXPXGR----GGXXGXXXXXXGAXXXGGXGGXGQXGGXRXWKXXGXGGGXGGK 742
G GR GG G G GG GG G GG R G GG G+
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSRGGFGG-GSRGGSRGGFRGGSRGGFRGR 193
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 746 PPSPPPXPXXFXXLXPPXWPXPPXPPXXXAPXXXXXXPXXPPLP 877
P P P P P P PP P P PPLP
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +2
Query: 746 PPSPPPXPXXFXXLXPPXWPXPPXPPXXXAPXXXXXXPXXPPLPXGXPXXXXXXXXXPPP 925
PP P P PP P P P P P P +P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQ 636
Query: 926 PP 931
PP
Sbjct: 637 PP 638
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/68 (25%), Positives = 18/68 (26%)
Frame = +2
Query: 728 PPXXXXPPSPPPXPXXFXXLXPPXWPXPPXPPXXXAPXXXXXXPXXPPLPXGXPXXXXXX 907
PP P P P P P P PP P P +P
Sbjct: 637 PPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNE 696
Query: 908 XXXPPPPP 931
PP PP
Sbjct: 697 PVVPPLPP 704
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/71 (23%), Positives = 19/71 (26%)
Frame = +2
Query: 719 SXXPPXXXXPPSPPPXPXXFXXLXPPXWPXPPXPPXXXAPXXXXXXPXXPPLPXGXPXXX 898
S P PP+ P P PP P P P P P +P
Sbjct: 508 SVITPSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 899 XXXXXXPPPPP 931
P PP
Sbjct: 568 VPEALSVPQPP 578
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/61 (24%), Positives = 16/61 (26%)
Frame = +1
Query: 748 PXPPXLPXXFPXPXXXXLAPXPXXPXXPXPPXXXXXPXXPPPXXRXPXXXXXXXXXXPPP 927
P P P P + P P P PP P P R P P
Sbjct: 608 PVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQP 667
Query: 928 P 930
P
Sbjct: 668 P 668
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +2
Query: 446 HALKLIXQQNHNKLXSVTPKTKPAESLLXVYPRVGXPQXXPSXSXPXRTXRT*SSLHPNP 625
HA+ I Q V PKT A S+L PR S + T + +HP P
Sbjct: 796 HAVPPIHQIKQTGYAPVQPKTSQASSILPTVPRT---TSYTSPYATTSSHITPADVHPLP 852
Query: 626 P 628
P
Sbjct: 853 P 853
>SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 315
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 427 HKQKGPSRPQVDRXTKPQQIAFGDSKDXTXRKSPXSLPPCWK 552
H ++ TKP+ + F D D R +P SL WK
Sbjct: 186 HSYNEVMEKMLNACTKPEMMQFNDGNDIPLRSNPVSL---WK 224
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +3
Query: 810 PPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP 926
P PP P P PP PP P P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/62 (24%), Positives = 15/62 (24%)
Frame = +3
Query: 747 PXPPXPXPXXSXPFXXPXGPXPPXPPXXXPPXXXXXPXXXPPXPPAPPXPXXXXXXXPPP 926
P PP P P P PP P P P P P
Sbjct: 1884 PPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLSSMPNA 1943
Query: 927 PP 932
PP
Sbjct: 1944 PP 1945
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Frame = +3
Query: 855 PXXXPPXPPAP--PXPXXXXXXXPPPPP 932
P P PAP P P PPPPP
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPP 748
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,538,033
Number of Sequences: 5004
Number of extensions: 42971
Number of successful extensions: 451
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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