Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L05
         (962 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   2.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   4.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   4.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   8.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   8.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   8.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   8.2  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 482 HLFLEHRPWLGLSHAEI 432
           H F ++RPW+   H E+
Sbjct: 488 HTFYDYRPWVQHGHQEL 504


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 302 APLIKHIQARGAAAFVPQ 355
           A L +HI A  AAAF PQ
Sbjct: 106 ATLRQHIPASVAAAFAPQ 123


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 327 PEGLRPSCHSTPEGA*GCYTWRPV 398
           P G   +   +P GA G Y +RP+
Sbjct: 56  PTGTHDAGFPSPRGALGAYPFRPM 79


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 708 VXXPPPXTPXXXPPQXXPXXAPXFXYNNL*XNXLS 812
           V  PPP  P   PP+      P    N L  N L+
Sbjct: 733 VKLPPPPHPHHQPPRNPVGTNPHDINNPLSVNQLT 767


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 708 VXXPPPXTPXXXPPQXXPXXAPXFXYNNL*XNXLS 812
           V  PPP  P   PP+      P    N L  N L+
Sbjct: 625 VKLPPPPHPHHQPPRNPVGTNPHDINNPLSVNQLT 659


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 376 PHAPSGVLWHEGRSPSGLD 320
           P++P+G +  E  SPS L+
Sbjct: 146 PYSPNGKIGREDLSPSSLN 164


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 144 KALAGFGFIGLILPP 100
           K L GFG I  +LPP
Sbjct: 113 KMLTGFGKIEQVLPP 127


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +2

Query: 323 QARGAAAFVPQYAGGRMR 376
           Q R AA  VPQ AGG  R
Sbjct: 313 QRRVAAVQVPQLAGGGRR 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,000
Number of Sequences: 336
Number of extensions: 4214
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27202879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)