BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L05
(962 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38928-1|AAC41945.1| 203|Homo sapiens 5,10-methenyltetrahydrofo... 109 2e-23
BC019921-1|AAH19921.1| 203|Homo sapiens 5,10-methenyltetrahydro... 109 2e-23
BC012417-1|AAH12417.1| 193|Homo sapiens MTHFS protein protein. 106 1e-22
BC037852-1|AAH37852.1| 94|Homo sapiens MTHFS protein protein. 52 4e-06
BX537864-1|CAD97867.1| 270|Homo sapiens hypothetical protein pr... 34 0.89
BC037404-1|AAH37404.1| 1015|Homo sapiens formin binding protein ... 34 0.89
AK022987-1|BAB14348.1| 560|Homo sapiens protein ( Homo sapiens ... 34 0.89
AB023231-1|BAA76858.2| 1050|Homo sapiens KIAA1014 protein protein. 34 0.89
Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory elem... 32 2.7
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 32 2.7
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 32 2.7
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 32 2.7
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 32 2.7
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 32 2.7
AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory ele... 32 2.7
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 32 2.7
AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LAS... 32 2.7
AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein. 32 2.7
>L38928-1|AAC41945.1| 203|Homo sapiens
5,10-methenyltetrahydrofolate synthetase protein.
Length = 203
Score = 109 bits (261), Expect = 2e-23
Identities = 56/138 (40%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Frame = +2
Query: 110 MSPIKPNPAKALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRIALYMSTEN 289
M+ + AK LR E+ ++ A++ EE+ RQS+++ +KVI HS Y+ S RI++++S ++
Sbjct: 1 MAAAAVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD 60
Query: 290 EIDTAPLIKHIQARGAAAFVPQY--AGGRMRMLHLETGDE-QTMPKTKHGISQHGKDQAR 460
EI+T +IK I RG F+P+Y M M+ +E+ +E +PKT I Q G+ R
Sbjct: 61 EIETEEIIKDIFQRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVR 120
Query: 461 DDALETGGLDLIIAPGGG 514
++AL TGGLDLI PG G
Sbjct: 121 EEALSTGGLDLIFMPGLG 138
Score = 51.6 bits (118), Expect = 4e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 508 GWRFLXSGDRLGHGXGYYDKFITNLRLNPETAPKIVAVAFNCQVVDEVPTTEQDXKVXEV 687
G F G+RLG G GYYD ++ + E P +A+AF Q+ +VP E D KV EV
Sbjct: 136 GLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVKPYTLALAFKEQICLQVPVNENDMKVDEV 195
Query: 688 XF 693
+
Sbjct: 196 LY 197
>BC019921-1|AAH19921.1| 203|Homo sapiens
5,10-methenyltetrahydrofolate synthetase
(5-formyltetrahydrofolate cyclo-ligase protein.
Length = 203
Score = 109 bits (261), Expect = 2e-23
Identities = 56/138 (40%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Frame = +2
Query: 110 MSPIKPNPAKALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRIALYMSTEN 289
M+ + AK LR E+ ++ A++ EE+ RQS+++ +KVI HS Y+ S RI++++S ++
Sbjct: 1 MAAAAVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD 60
Query: 290 EIDTAPLIKHIQARGAAAFVPQY--AGGRMRMLHLETGDE-QTMPKTKHGISQHGKDQAR 460
EI+T +IK I RG F+P+Y M M+ +E+ +E +PKT I Q G+ R
Sbjct: 61 EIETEEIIKDIFQRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVR 120
Query: 461 DDALETGGLDLIIAPGGG 514
++AL TGGLDLI PG G
Sbjct: 121 EEALSTGGLDLIFMPGLG 138
Score = 51.6 bits (118), Expect = 4e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 508 GWRFLXSGDRLGHGXGYYDKFITNLRLNPETAPKIVAVAFNCQVVDEVPTTEQDXKVXEV 687
G F G+RLG G GYYD ++ + E P +A+AF Q+ +VP E D KV EV
Sbjct: 136 GLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVKPYTLALAFKEQICLQVPVNENDMKVDEV 195
Query: 688 XF 693
+
Sbjct: 196 LY 197
>BC012417-1|AAH12417.1| 193|Homo sapiens MTHFS protein protein.
Length = 193
Score = 106 bits (254), Expect = 1e-22
Identities = 53/126 (42%), Positives = 82/126 (65%), Gaps = 3/126 (2%)
Frame = +2
Query: 146 LRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRIALYMSTENEIDTAPLIKHIQ 325
LR E+ ++ A++ EE+ RQS+++ +KVI HS Y+ S RI++++S ++EI+T +IK I
Sbjct: 3 LRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIF 62
Query: 326 ARGAAAFVPQY--AGGRMRMLHLETGDE-QTMPKTKHGISQHGKDQARDDALETGGLDLI 496
RG F+P+Y M M+ +E+ +E +PKT I Q G+ R++AL TGGLDLI
Sbjct: 63 QRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALSTGGLDLI 122
Query: 497 IAPGGG 514
PG G
Sbjct: 123 FMPGLG 128
Score = 51.6 bits (118), Expect = 4e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 508 GWRFLXSGDRLGHGXGYYDKFITNLRLNPETAPKIVAVAFNCQVVDEVPTTEQDXKVXEV 687
G F G+RLG G GYYD ++ + E P +A+AF Q+ +VP E D KV EV
Sbjct: 126 GLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVKPYTLALAFKEQICLQVPVNENDMKVDEV 185
Query: 688 XF 693
+
Sbjct: 186 LY 187
>BC037852-1|AAH37852.1| 94|Homo sapiens MTHFS protein protein.
Length = 94
Score = 51.6 bits (118), Expect = 4e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 508 GWRFLXSGDRLGHGXGYYDKFITNLRLNPETAPKIVAVAFNCQVVDEVPTTEQDXKVXEV 687
G F G+RLG G GYYD ++ + E P +A+AF Q+ +VP E D KV EV
Sbjct: 27 GLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVKPYTLALAFKEQICLQVPVNENDMKVDEV 86
Query: 688 XF 693
+
Sbjct: 87 LY 88
>BX537864-1|CAD97867.1| 270|Homo sapiens hypothetical protein
protein.
Length = 270
Score = 33.9 bits (74), Expect = 0.89
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 666 RPXSGRGXIPXXXIVXXPPPXTPXXXPPQXXPXXAP 773
+P RG +P I+ PPP P PP P P
Sbjct: 226 QPVQARGAVPTATIIEPPPPPPPPPPPPPPAPKMPP 261
>BC037404-1|AAH37404.1| 1015|Homo sapiens formin binding protein 4
protein.
Length = 1015
Score = 33.9 bits (74), Expect = 0.89
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 666 RPXSGRGXIPXXXIVXXPPPXTPXXXPPQXXPXXAP 773
+P RG +P I+ PPP P PP P P
Sbjct: 887 QPVQARGAVPTATIIEPPPPPPPPPPPPPPAPKMPP 922
>AK022987-1|BAB14348.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ12925 fis, clone NT2RP2004710, highly similar to
Mus musculus formin binding protein 30 mRNA. ).
Length = 560
Score = 33.9 bits (74), Expect = 0.89
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 666 RPXSGRGXIPXXXIVXXPPPXTPXXXPPQXXPXXAP 773
+P RG +P I+ PPP P PP P P
Sbjct: 432 QPVQARGAVPTATIIEPPPPPPPPPPPPPPAPKMPP 467
>AB023231-1|BAA76858.2| 1050|Homo sapiens KIAA1014 protein protein.
Length = 1050
Score = 33.9 bits (74), Expect = 0.89
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 666 RPXSGRGXIPXXXIVXXPPPXTPXXXPPQXXPXXAP 773
+P RG +P I+ PPP P PP P P
Sbjct: 922 QPVQARGAVPTATIIEPPPPPPPPPPPPPPAPKMPP 957
>Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 2116 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 2157
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 3083 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 3124
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 3083 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 3124
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 3083 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 3124
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 3083 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 3124
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 3083 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 3124
>AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 2116 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 2157
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 3083 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 3124
>AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LASU1
protein.
Length = 3360
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 2069 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 2110
>AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein.
Length = 3192
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 140 ALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRI 265
A++ +IAA+ AL E++ RQ Q+++E++ HS + S I
Sbjct: 1901 AVMPPDIAAEAQALRREQEARQRQLMHERLFGHSSTSALSAI 1942
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,519,841
Number of Sequences: 237096
Number of extensions: 2971256
Number of successful extensions: 8333
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7832
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12769697060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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