Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L05
         (962 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   2.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   9.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   9.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 458 WLGLSHAEISRV*FLAWSAHHRSPSVTSSCA-LRRTVARRPQP 333
           WLG  ++ ++ V +  WS   R   V   CA     V RR QP
Sbjct: 377 WLGWINSGMNPVIYACWSRDFRRAFVRILCACCPGRVRRRYQP 419


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 50  QFGVDIKWLSPCY 88
           + GVD+ WLSP Y
Sbjct: 63  EMGVDMFWLSPIY 75


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 50  QFGVDIKWLSPCY 88
           + GVD+ WLSP Y
Sbjct: 63  EMGVDMFWLSPIY 75


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 311 LEEQCLSHFRCSCREQYDLM 252
           L E C  H RC  R   D+M
Sbjct: 475 LPEPCRCHARCIARLALDMM 494


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 311 LEEQCLSHFRCSCREQYDLM 252
           L E C  H RC  R   D+M
Sbjct: 475 LPEPCRCHARCIARLALDMM 494


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,155
Number of Sequences: 438
Number of extensions: 6169
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31686018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)