Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L02
         (1004 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   8.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   8.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 15/54 (27%), Positives = 15/54 (27%)
 Frame = +3

Query: 621 PGXPGXNQTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPSXP 782
           PG       ST  A PS              P         PPP P   PP  P
Sbjct: 696 PGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNP 749


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 15/54 (27%), Positives = 15/54 (27%)
 Frame = +3

Query: 621 PGXPGXNQTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPSXP 782
           PG       ST  A PS              P         PPP P   PP  P
Sbjct: 588 PGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNP 641


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 570  TVPPPPXXGXELXFPPXPGXPG 635
            T+PPP     E+  P  P  PG
Sbjct: 1085 TIPPPAVVMPEVDKPSQPCEPG 1106


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 732 PPXXPPPXPXXHP 770
           PP  P P P  HP
Sbjct: 115 PPLTPSPGPPSHP 127


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 702 RRXPPXPPXFPPXXPP 749
           R+ P  P  +PP  PP
Sbjct: 20  RKRPHSPEPYPPRCPP 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,682
Number of Sequences: 336
Number of extensions: 2110
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28650941
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)