Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_L02
(1004 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 6e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.005
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.063
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.45
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.45
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.59
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.78
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.0
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.4
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.9 bits (89), Expect = 6e-04
Identities = 32/105 (30%), Positives = 34/105 (32%), Gaps = 13/105 (12%)
Frame = +3
Query: 516 PXPPPQX----PXXLPPXRXXXTVPPPPXXGXELXFPPXP---GXPGXNQTSTQXAXPSX 674
P PPP+ LPP PPPP P P N + A P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 675 XHP---PXXRXXRRXPPX---PPXFPPXXPPPXPXXHPPSXPXXA 791
P P R P PP PP PP P PPS P A
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA 443
Score = 35.5 bits (78), Expect = 0.012
Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 4/91 (4%)
Frame = +3
Query: 522 PPPQXPXXLPPXRXXXTVPPPPXXGXELXFPPXP--GXPGXNQTSTQXAXPSXXH--PPX 689
PPP P P PPP + PP P PG + + + PP
Sbjct: 361 PPPPPPRSAPSTGRQ---PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPV 417
Query: 690 XRXXRRXPPXPPXFPPXXPPPXPXXHPPSXP 782
P PP PP PP P P + P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 32.7 bits (71), Expect = 0.084
Identities = 28/97 (28%), Positives = 29/97 (29%), Gaps = 5/97 (5%)
Frame = +3
Query: 516 PXPPPQXPXX----LPPX-RXXXTVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXH 680
P PPP P LPP T PP L P P S P+
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA-- 446
Query: 681 PPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPSXPXXA 791
PP PP P P P P PP P A
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Score = 31.5 bits (68), Expect = 0.19
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 11/100 (11%)
Frame = +3
Query: 516 PXPPPQXPXXLPPXRXXXTVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXP---SXXHPP 686
P PPP PP R PP PP P P N + P S PP
Sbjct: 311 PPPPP------PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Query: 687 XXRXXRRXPPXPPXF--------PPXXPPPXPXXHPPSXP 782
R PP PP PP P P+ P
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 29.9 bits (64), Expect = 0.59
Identities = 24/84 (28%), Positives = 27/84 (32%)
Frame = +3
Query: 522 PPPQXPXXLPPXRXXXTVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXHPPXXRXX 701
PP P LPP ++PP + P P P S A PP
Sbjct: 415 PPVPTPPSLPPSAPP-SLPPSAPPSLPMGAPAAPPLP----PSAPIA------PPLPAGM 463
Query: 702 RRXPPXPPXFPPXXPPPXPXXHPP 773
PP PP P P P P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 3.2
Identities = 26/92 (28%), Positives = 27/92 (29%), Gaps = 5/92 (5%)
Frame = +3
Query: 516 PXPPPQXPXXLPPXR---XXXTVPP--PPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXH 680
P PP P PP R PP PP + PP S A S
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 681 PPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPS 776
PP R PPP P PPS
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPP---PPS 318
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/84 (27%), Positives = 27/84 (32%)
Frame = +3
Query: 522 PPPQXPXXLPPXRXXXTVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXHPPXXRXX 701
P P P +PP + P PP P ST A P PP +
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPP--SAPLSKPVSTSPAAPLARVPPVPKLS 1018
Query: 702 RRXPPXPPXFPPXXPPPXPXXHPP 773
+ PP P P P P PP
Sbjct: 1019 SKAPPVPLPSADAPPIPVPSTAPP 1042
Score = 31.9 bits (69), Expect = 0.15
Identities = 25/92 (27%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Frame = +3
Query: 522 PPPQXPXXLPPXRXXXTVPPPPXXGXELXFPPXPGX----PGXNQTSTQXAXPSXXHPPX 689
P P+ PP PP P P P P + + PS PP
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 690 XRXXRRXPPXPPXFPPXXPP-PXPXXHPPSXP 782
+ PP PP P PP P P P P
Sbjct: 1182 PKPAAGVPPVPP--PSEAPPVPKPSVGVPPVP 1211
Score = 29.9 bits (64), Expect = 0.59
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 7/91 (7%)
Frame = +3
Query: 522 PPPQXPXXLPPXRXXXTVPPPPXX--GXELXFPPXPGX----PGXNQTSTQXAXPSXXH- 680
PP P PP + PP P G PP P P S P+
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 681 PPXXRXXRRXPPXPPXFPPXXPPPXPXXHPP 773
PP + PP P P P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 26.2 bits (55), Expect = 7.3
Identities = 22/89 (24%), Positives = 25/89 (28%), Gaps = 4/89 (4%)
Frame = +3
Query: 522 PPPQXPXXLPPXRXXXTVPPP---PXXGXELXFPPXPGXPGXNQT-STQXAXPSXXHPPX 689
P P+ PP + PP P G PP P + P PP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 690 XRXXRRXPPXPPXFPPXXPPPXPXXHPPS 776
PP P P P P PS
Sbjct: 1220 PTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.063
Identities = 23/91 (25%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Frame = +3
Query: 516 PXPPPQXPXXLPPXRXXX--TVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXHPPX 689
P PP PP ++PPP P P Q A P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 690 XRXXRRXPPXPPXFPPXXPPPXPXXHPPSXP 782
PP PP PP P + S P
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
Score = 31.9 bits (69), Expect = 0.15
Identities = 22/71 (30%), Positives = 26/71 (36%)
Frame = +3
Query: 570 TVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPP 749
+ P PP EL PP P + S P+ P + PP P PP P
Sbjct: 126 SAPAPPTPQSELR-PPTSAPP---RPSIPPPSPASAPP----IPSKAPPIPSSLPPPAQP 177
Query: 750 PXPXXHPPSXP 782
P PPS P
Sbjct: 178 AAPVKSPPSAP 188
Score = 31.1 bits (67), Expect = 0.26
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 642 QTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPPPXPXXHPP 773
++S A PS PP + R P P P PPP P PP
Sbjct: 117 KSSASAAPPSAPAPPTPQSELRPPTSAPP-RPSIPPPSPASAPP 159
Score = 30.3 bits (65), Expect = 0.45
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = +3
Query: 525 PPQXPXXLPPXRXXXTVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXHPPXXRXXR 704
PP P PP PP PP P + S P
Sbjct: 124 PPSAPA--PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 705 RXPPXPPXFPPXXPPPXPXXHPP 773
+ PP P P PP P PP
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPP 204
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.45
Identities = 26/81 (32%), Positives = 27/81 (33%)
Frame = -2
Query: 757 GXGGGXXGGKXGGXGGXRRXXRXXGGWXXLGXAXWVXVWXXPGXPGXGGKXSSXPXXGGG 578
G GG GG GG GG GG+ G G G GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEG----HHHGGHGGFGGGPGGFEGGPGG 239
Query: 577 GTVXXXRXGGRXLGXCGGGXG 515
GG LG GGG G
Sbjct: 240 FGGGPGGFGG-GLGGFGGGPG 259
Score = 27.5 bits (58), Expect = 3.2
Identities = 30/94 (31%), Positives = 30/94 (31%), Gaps = 5/94 (5%)
Frame = -2
Query: 781 GXEGGWXXGXGGGXXG-----GKXGGXGGXRRXXRXXGGWXXLGXAXWVXVWXXPGXPGX 617
G GG G GGG G G GG GG GG G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG-------PGGFEGG 236
Query: 616 GGKXSSXPXXGGGGTVXXXRXGGRXLGXCGGGXG 515
G P GGG GG G GGG G
Sbjct: 237 PGGFGGGPGGFGGG---LGGFGGGP-GGFGGGPG 266
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.45
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 796 RSAXXGXEGGWXXGXGGGXXGGKXGGXGGXRRXXRXXGG 680
R G GG+ G GG GG+ G GG GG
Sbjct: 18 RGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.59
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 796 RSAXXGXEGGWXXGXGGGXXGGKXGGXGGXRRXXRXXG 683
R G GG+ GG GG GG GG R G
Sbjct: 144 RGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 781 GXEGGWXXGXGGGXXGGKXGGXGGXRR 701
G GG G GGG GG GG G R
Sbjct: 161 GFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -2
Query: 790 AXXGXEGGWXXGXG---GGXXGGKXGGXGGXRR 701
A G GG+ G G GG G GG GG R
Sbjct: 135 AGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSR 167
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.78
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 624 GXPGXNQTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPSXPXXAL 794
G + ST P PP PP PP PP P PPS P L
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG-PPSAPPPPL 1735
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +3
Query: 654 QXAXPSXXHPPXX-RXXRRXPPXPPXFPPXXPPPXPXXHPPSXP 782
Q + P+ PP PP P P PPP P PS P
Sbjct: 1701 QMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 522 PPPQXPXXLPPXRXXXTVPPPPXXGXELXFPPXPGXP 632
PP + PP T PPPP + PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPP-----MSVPPPPSAP 1721
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 516 PXPPPQXPXXLPPXRXXXTVPPP-PXXGXELXFPPXPGXPG 635
P PPP P VPPP P G PP PG G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Frame = +2
Query: 509 PXPXPPPTX-----PXXPPPXSXAXHGSPXPXXGPGTXFPPXTRXXRGXPNXYP 655
P P PPP P PPP A G P P P +R P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 603 LXFPPXPGXPGXNQTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPS 776
L PP P P T P PP PP PP PP P PP+
Sbjct: 729 LKSPPPP--PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 720 PPXFPPXXPPPXPXXHPPSXP 782
PP PP PPP P PPS P
Sbjct: 5 PPGNPPPPPPP-PGFEPPSQP 24
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Frame = +3
Query: 711 PPXPPXF-PPXXPPPXP 758
PP PP F PP PPP P
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 516 PXPPPQXPXXLPPXRXXXTVPPPPXXG 596
P PPP P PP + PPPP G
Sbjct: 9 PPPPPPPPGFEPPSQP----PPPPPPG 31
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 494 NPLXPPAWGGFXXQKKXXPPPPXXXKXKGK 405
NP PP GF + PPPP K K
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 711 PPXPPXFPPXXPPPXPXXHPP 773
PP PP P PP P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 143
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 1004 VEGPGAXLGXRGXGRXXGRGXR 939
+ GP G RG GR GRG R
Sbjct: 119 LHGPHGGFGGRGGGRMGGRGGR 140
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/57 (24%), Positives = 17/57 (29%)
Frame = +3
Query: 612 PPXPGXPGXNQTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPSXP 782
PP P P + P + P PP + P P P PP P
Sbjct: 191 PPPPPPPAVEDQAADANEPDDYYSSGRAVS---PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 509 PXPXPPPTXPXXPPPXSXAXHGSPXP 586
P P PPP P PP S P P
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMP 259
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,744,159
Number of Sequences: 5004
Number of extensions: 22049
Number of successful extensions: 187
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 521265546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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