Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_L02
         (1004 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    23   3.3  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    23   3.3  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    23   3.3  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    23   3.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   3.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   3.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   3.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   3.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.3  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 147 PPTP--FPRFIPPNAYRFHPPLNP 168


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 147 PPTP--FPRFIPPNAYRFHPPLNP 168


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 147 PPTP--FPRFIPPNAYRFHPPLNP 168


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 147 PPTP--FPRFIPPNAYRFHPPLNP 168


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 151 PPTP--FPRFIPPNAYRFHPPLNP 172


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 156 PPTP--FPRFIPPNAYRFHPPLNP 177


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 156 PPTP--FPRFIPPNAYRFHPPLNP 177


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 711 PPXPPXFPPXXPPPXPXXHPPSXP 782
           PP P  FP   PP     HPP  P
Sbjct: 156 PPTP--FPRFIPPNAYRFHPPLNP 177


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +3

Query: 546 LPPXRXXXTVPPPPXXGXELXFPPXPGXPGXNQTSTQXAXPSXXHP 683
           LPP      +PP P        PP P  PG     T    PS   P
Sbjct: 409 LPPSAGAP-MPPIPNMSNMSGMPPLPNMPG--SMPTMPTMPSMAGP 451



 Score = 22.2 bits (45), Expect = 7.6
 Identities = 14/54 (25%), Positives = 15/54 (27%)
 Frame = +3

Query: 615 PXPGXPGXNQTSTQXAXPSXXHPPXXRXXRRXPPXPPXFPPXXPPPXPXXHPPS 776
           P  G PG   +  Q         P        P  PP  PP   P      P S
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPAS 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,681
Number of Sequences: 438
Number of extensions: 5716
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33379164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)