Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K22
         (970 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.26 
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    24   2.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    24   2.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    24   2.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    24   2.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    24   2.4  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   7.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   9.6  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   9.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
 Frame = +1

Query: 847 PHPXPTAPXPRXPXXP---PPPXXXPPKPP 927
           PH  P AP    P  P   PPP   P  PP
Sbjct: 27  PHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 22.6 bits (46), Expect = 5.5
 Identities = 11/40 (27%), Positives = 11/40 (27%)
 Frame = +3

Query: 846 PXPXXXXPXPXLXXXPPPPPXXXSXTPXPXPPPWXPXXPP 965
           P      P P     P  P       P   PPP  P   P
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/40 (27%), Positives = 11/40 (27%)
 Frame = +1

Query: 847 PHPXPTAPXPRXPXXPPPPXXXPPKPPXPXXXRGXPPXXP 966
           P      P P     P  P    P  P      G PP  P
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 NYSTKCNNINYIE 329
           NY   C NINYIE
Sbjct: 98  NYKQLCYNINYIE 110


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 NYSTKCNNINYIE 329
           NY   C NINYIE
Sbjct: 98  NYKQLCYNINYIE 110


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 NYSTKCNNINYIE 329
           NY   C NINYIE
Sbjct: 98  NYKQLCYNINYIE 110


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 NYSTKCNNINYIE 329
           NY   C NINYIE
Sbjct: 98  NYKQLCYNINYIE 110


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 NYSTKCNNINYIE 329
           NY   C NINYIE
Sbjct: 98  NYKQLCYNINYIE 110


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 673 PPXPLXPPXPP 705
           PP P  PP PP
Sbjct: 338 PPKPAPPPPPP 348


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/33 (30%), Positives = 11/33 (33%)
 Frame = +1

Query: 847 PHPXPTAPXPRXPXXPPPPXXXPPKPPXPXXXR 945
           PHP         P    P     P+PP P   R
Sbjct: 112 PHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRR 144


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 NYSTKCNNINYIE 329
           NY   C NIN+IE
Sbjct: 98  NYKQLCYNINHIE 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,726
Number of Sequences: 438
Number of extensions: 6012
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31927896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)