Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K21
         (934 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 509 ILPLFY*LLKIFMFICLRYYCRYF 438
           +L ++Y    + + +C+ Y+CR F
Sbjct: 282 LLCIYYFYCALIILLCIYYFCRAF 305



 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/24 (29%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 509 ILPLFY*LLKIFMFICLRY-YCRY 441
           +L ++Y ++ +F  +C+ Y YC +
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAF 153


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 570 ELTKGHRVTNTSPYFFKIPDYSSI 499
           E+T+     N    FFKIP YS++
Sbjct: 350 EMTQNSTNINFVSTFFKIPFYSTL 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,373
Number of Sequences: 336
Number of extensions: 3155
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)