Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K21
(934 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.10
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.13
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.31
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.71
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 27 3.8
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 27 5.0
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 26 8.7
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 920 GGXXPXXXXRGGAGGXXGGGXGXGXXGXXGXXPGXXGGWXXRXG 789
GG RGG GG GG G G G G G G R G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 727 PPIIITXSPXPXXPXXXXQXXPLLXXXPPXXPGXXPXXPXXPXPXPPP 870
PP +I +P P P P++ PP P P P PPP
Sbjct: 736 PPAVIVPTPAPA-PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.41
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 808 PPXXPGXXPXXPXXPXPXPPPXXPPAPPLXXXXGXXPPXP 927
P P P P P PP PP PP G PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP-PPGVAGAGPPPPPP 780
Score = 29.1 bits (62), Expect = 0.94
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = +1
Query: 739 ITXSPXPXXPXXXX---QXXPLLXXXPPXXPGXXPXXPXXPXPXPPPXXPPAPPLXXXXG 909
I+ SP P P + LL PP P P P P P P PP G
Sbjct: 706 ISSSPSPLLPDVSDTVEEQQKLLLKSPPPPP------PAVIVPTPAPAPIPVPPPAPIMG 759
Query: 910 XXPPXP 927
PP P
Sbjct: 760 GPPPPP 765
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Frame = +3
Query: 804 PXPXXPRXXXXXPXX---PXPPPXPXX--PXRAXPPXXXXGXXPPP 926
P P P P P PPP P P PP G PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 8/58 (13%)
Frame = +1
Query: 736 IITXSPXPXXPXXXXQXX-PLLXXXPPXXP--GXXPXXPXXP-----XPXPPPXXPPA 885
++ SP P P P PP P G P P P P PPP PPA
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +1
Query: 727 PPIIITXSPXPXXPXXXXQXXPLLXXXPPXXPGXXPXXPXXPXPXP-PPXXPPAPPLXXX 903
PP+ S P P P P P P P P P P P APPL
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAP--PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Query: 904 XGXXPPXP 927
PP P
Sbjct: 473 APAPPPAP 480
Score = 29.9 bits (64), Expect = 0.54
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 790 PLLXXXPPXXPGXXPXXPXXPXPXPPPXXPPAPPL 894
P+ P P P P P P P P PA P+
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPV 488
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +1
Query: 748 SPXPXXPXXXXQXXPLLXXXPPXXPGXXPXXPXXPXPXPPPXXPPAPP-LXXXXGXXPPX 924
+P P P P L P P P PP P APP L PP
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Query: 925 P 927
P
Sbjct: 450 P 450
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 808 PPXXPGXXPXX--PXXPXPXPPPXXPPAPPLXXXXGXXPPXP 927
PP P P P P PPP PP+ PP P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.31
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = -3
Query: 926 GXGGXXPXXXXRGGAGGXXGG--GXGXGXXGXXGXXPGXXGGWXXRXGXYWXXXXGXXG* 753
G GG GG GG GG G G G G G GG+ G + G G
Sbjct: 212 GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Query: 752 G 750
G
Sbjct: 272 G 272
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 809 PXXPPAXXXXPPXXXXPXXPXXPXPRXPSXXPXGXXPPXPXP 934
P PP PP P P P P P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Frame = +1
Query: 808 PPXXP-GXXPXXPXXPXPXPPPXXPPAPPLXXXXGXXPP 921
PP P P P P PPP P PP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 795 PXXPXPXXPRXXXXXPXXPXPPPXPXXPXRAXPPXXXXGXXP 920
P P P P P PP P P A PP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 820 PGXXPXXPXXPXPXPPPXXPPAPP 891
PG P P P PP PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 808 PPXXPGXXPXXPXXPXPXPPPXXPPAPP 891
PP P P P P PP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP--PPPPP 30
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 795 PXXPXPXXPRXXXXXPXXPXPPPXP 869
P P P P P P PPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 751 PXPXXPXXXXQXXPLLXXXPPXXPGXXPXXPXXPXPXPPPXXPPAPP 891
P P P PP P P P P P PPA P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 PPIIITXSPXPXX-PXXXXQXXPLLXXXPPXXPGXXPXXPXXPXPXPPPXXPPAP 888
PPI P P P P+ PP P P P PPP AP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPV--KSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Frame = +3
Query: 750 PSXXAPXXXAPIXXXPXXP----XPXXPRXXXXXPXXPXP---PPXPXXPXRAXPPXXXX 908
PS AP P P P P P+ P P P PP P P A PP
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP-KPSVAAPPVPAP 1155
Query: 909 GXXPP 923
PP
Sbjct: 1156 SGAPP 1160
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +3
Query: 750 PSXXAPXXXAPIXXXPXXPXPXXPRXXXXXPXXPXPPPXPXXPXRAXPPXXXXGXXPPP 926
PS AP AP P P P P P P P PP P P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/68 (25%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +1
Query: 727 PPIIITXSPXPXXPXXXXQXXPLLXXXPPXXPGXXPXXPXXPXPXPPPXXPP-APPLXXX 903
P + P P P + P P P P PP P APP+
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 904 XGXXPPXP 927
PP P
Sbjct: 1165 SVAAPPVP 1172
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/63 (26%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
Frame = +3
Query: 747 LPSXXAPXXXAPIXXXP---XXPXPXXPRXXXXXPXXPXPPPXPXXPXRAXPPXXXXGXX 917
LPS AP P P P P+ P P P P P + P
Sbjct: 1026 LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
Query: 918 PPP 926
P P
Sbjct: 1086 PAP 1088
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 443 YFCCIXVLAAKQYPCFSISLXGLTITSFL*YFF 345
Y CC + + QY F ISL L + L + F
Sbjct: 72 YLCCGRLQMSSQYKAFLISLFALILPGVLFFIF 104
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 152 GSTAHNH-YANDGDKYYFCKIHF 87
G ++H + + ND ++Y+CK HF
Sbjct: 200 GFSSHTYKFVNDKGEFYYCKWHF 222
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +3
Query: 414 SRQDXNTAEISTIVSQTYKHEYLQKLIEQWK 506
+ +D E+ I+ Q + EY+ +++ WK
Sbjct: 30 TERDLKLPELGDIIGQVHAPEYISQVLSGWK 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,670,204
Number of Sequences: 5004
Number of extensions: 47086
Number of successful extensions: 283
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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