Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K21
         (934 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   5.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 16/52 (30%), Positives = 17/52 (32%)
 Frame = +1

Query: 730 PIIITXSPXPXXPXXXXQXXPLLXXXPPXXPGXXPXXPXXPXPXPPPXXPPA 885
           PII   S  P       Q  P      P   G  P     P P  PP  PP+
Sbjct: 7   PIITQQSQQPSSGAPGPQPSPHQSPQAPQR-GSPPNPSQGPPPGGPPGAPPS 57



 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = +1

Query: 841 PXXPXPXPPPXXPP-APP 891
           P  P   PPP  PP APP
Sbjct: 39  PPNPSQGPPPGGPPGAPP 56



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 849 PXPPPXPXXPXRAXPPXXXXGXXPPP 926
           P P   P  P R  PP    G  PPP
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQG--PPP 48


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +1

Query: 160 TFLKSLKVWVREFAI-RSSAL 219
           T  K +K+W+  FAI R SA+
Sbjct: 389 TIPKEMKIWIPAFAIHRDSAI 409


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 514  WNFEEVGAXVGYPMTLSE 567
            WN E +G  VGY ++ SE
Sbjct: 1005 WNGEILGYYVGYRLSSSE 1022


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,006
Number of Sequences: 438
Number of extensions: 4431
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30476628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)