Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K19
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023207-1|BAA76834.2|  883|Homo sapiens KIAA0990 protein protein.     31   5.7  

>AB023207-1|BAA76834.2|  883|Homo sapiens KIAA0990 protein protein.
          Length = 883

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = +2

Query: 155 GRXVPTRARRXAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASXGL 334
           GR   T+ RR A       DG  G A    L G     L+A+G A    R + +  + GL
Sbjct: 8   GRACGTKRRRGACGRLGGRDGRGGPAAAAALPGPG---LAALGRAGLRGRGQRAEGARGL 64

Query: 335 ALEQRKRAR 361
              +R+R R
Sbjct: 65  RRRRRRRRR 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,652,403
Number of Sequences: 237096
Number of extensions: 1097485
Number of successful extensions: 12775
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 12708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12775
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)