Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K17
(963 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 33 0.26
05_01_0499 - 4166891-4166942,4167191-4167510 31 1.4
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016 31 1.8
12_02_1060 - 25752181-25754229 30 2.4
12_02_1057 + 25733376-25735439 30 2.4
11_01_0359 - 2731522-2732346 29 5.5
06_03_0854 + 25400855-25403741,25406174-25407708 29 5.5
05_07_0359 - 29539294-29540832,29542366-29542518 29 5.5
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 29 5.5
06_01_0931 + 7192519-7194075 29 7.3
02_04_0470 - 23183925-23184743,23184929-23185153 29 7.3
02_02_0272 - 8452994-8453187,8453850-8454975 29 7.3
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 9.6
11_06_0202 - 21184217-21184503,21184622-21184982 28 9.6
07_03_0723 + 20954827-20954905,20954974-20956277 28 9.6
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 28 9.6
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275... 28 9.6
05_04_0398 - 20946852-20947214 28 9.6
03_03_0204 + 15436660-15437244,15437355-15437632,15438792-154390... 28 9.6
02_02_0450 - 10381360-10381391,10381737-10382283,10382770-103829... 28 9.6
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1
Query: 384 GMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMAL 268
G P R+SP L+ PAEAALS RSL S P ++
Sbjct: 138 GEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSI 176
>05_01_0499 - 4166891-4166942,4167191-4167510
Length = 123
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 474 LIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAA 313
LI LALR LL N + PS SP+ + R P P + + ASP+ +A
Sbjct: 5 LIIVPLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASPSSSA 58
>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
Length = 360
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 284 ADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVNL 427
A N+R + S AS +A + + HG+ + G P +G AG ++L
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSL 220
>12_02_1060 - 25752181-25754229
Length = 682
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 558 PPSV*TCSPLPPPSVLKLGAL-GMALGEFLIANALALRSWLLL 433
PPS P PPP + +G + G+ +G L + WLLL
Sbjct: 262 PPSPPPAPPAPPPPSVSIGLVAGLTVGAVSFVVVLGVSIWLLL 304
>12_02_1057 + 25733376-25735439
Length = 687
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 561 RPPSV*TCSPLPPPSVLKLGALGMALGEFLIANALALRSWLLL 433
RPPS P PPPSV G +G L + WLLL
Sbjct: 265 RPPSSSPAPPSPPPSVSGGLVAGSTVGAVSFLVVLGVSIWLLL 307
>11_01_0359 - 2731522-2732346
Length = 274
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 558 PPSV*TCSPLPPPSVLKLGALGMALGEFLIANALALRSWLLL 433
PP P PPP LG+ + FL+ A WLLL
Sbjct: 70 PPHHHPYPPHPPPPTCLRRLLGLVVAAFLLLGAATFIVWLLL 111
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.1 bits (62), Expect = 5.5
Identities = 36/143 (25%), Positives = 51/143 (35%), Gaps = 5/143 (3%)
Frame = -1
Query: 582 SAPRSTMRPPSV*TCSPLPPPSVLKLGALGMALGEFLIANALALRSWLLLWN--KLTLPA 409
+AP P ++ +P PP + L A G G IANA + K A
Sbjct: 422 AAPAPAPAPAALEALAPPPPAAPASLSASGGERGCVAIANAAVAGRGRGRGSGAKRAPTA 481
Query: 408 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTFR 229
+P P R P + P ++PA A S+ + +A A + F P
Sbjct: 482 VTVGAPPPQARTP---AAAPAKAFVSAPAPAPSSVISPVLAASASAAAAFAPAPAPAAAE 538
Query: 228 AAPEVP---SEFTVKLPACLRAR 169
P P + T PA R R
Sbjct: 539 VIPPPPLPAAASTAAAPAAERKR 561
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 29.1 bits (62), Expect = 5.5
Identities = 24/85 (28%), Positives = 33/85 (38%)
Frame = -1
Query: 405 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTFRA 226
P KPG P R +P P S +S A AA +L +K + P+R +
Sbjct: 155 PVLEAKPGRGRP-RKNPLPVASSTSSAAAAATALSLRVKRGPGRPRKNAAATPLRLGVKR 213
Query: 225 APEVPSEFTVKLPACLRARVGTCLP 151
P P + P L A+ G P
Sbjct: 214 GPGRPRKNAAATPLRLGAKRGPGRP 238
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 412 CDAELLPEAGNAGPGQTQPV 353
C A LLPE GN G GQ+ V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505
>06_01_0931 + 7192519-7194075
Length = 518
Score = 28.7 bits (61), Expect = 7.3
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = -1
Query: 576 PRSTMRPPSV*TCSPL---PPPSVLKLGALG-MALGEFLIANALALRSWLLLW-NKLTLP 412
P T + C+ L PP L +L A ++ +ALR+ +L W ++L+LP
Sbjct: 52 PGQTFERACIQACAALAFSPPAVAADLSSLPPSASSPLVLVPNVALRTAILNWCDRLSLP 111
Query: 411 ATPSCSPKPGMRVPVRLSPCP 349
SP V RL P P
Sbjct: 112 YPAPLSPDTARDVVRRLMPSP 132
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 28.7 bits (61), Expect = 7.3
Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Frame = -1
Query: 405 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAAL-----SLWRSLKSADPMALSTFLSLPVR 241
PS +PGMRV R SP +RA P +L S W P A ST S R
Sbjct: 159 PSLPAQPGMRVAHRWSPAK---ARALPPPPSLRYPSRSSWDGADLDGPTAASTTTSRRRR 215
Query: 240 GTFR-AAPEVPSEFTVKLPACLRARVGTCLPLA 145
R P S + + C RA + L A
Sbjct: 216 RHHRLVPPPAASPLSNRQRHCCRAAIAGALESA 248
>02_02_0272 - 8452994-8453187,8453850-8454975
Length = 439
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 369 VRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRG 238
+RL P P +L RA+ A + WR L +ADP L F + RG
Sbjct: 20 LRLPPRPSSLPRAA---AVCARWRRLVTADPAFLRRFRAHHRRG 60
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 372 PVRLSPCPFTLSRASPAEAA 313
P+RLSP P ++SR P+ AA
Sbjct: 153 PIRLSPSPRSMSRTRPSSAA 172
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 579 APRSTMRPPSV*TCSPL--PPPSVLKLGALGMALGEFLIANALALRSWLLL 433
AP+ + PP + SPL PPP GA G +G +A A+A+ + L L
Sbjct: 164 APKPSSPPPFT-SPSPLPPPPPPPTSHGARGATMGIGTVAAAVAMTTLLAL 213
>07_03_0723 + 20954827-20954905,20954974-20956277
Length = 460
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 399 CSPKPGMRVPVR-LSPCPFTLSRASPAEAALSLWR 298
CSP P R+P+R + C +ASP + + WR
Sbjct: 62 CSPAPSARIPLRGFTDCRL---KASPGSGSFTRWR 93
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 214 SVRVHCEAAGLSPRTCRHVST 152
S+R+HC A L+PR CR T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421
>07_01_0370 +
2749353-2749786,2749949-2750346,2750435-2750519,
2751200-2751314,2751538-2751591
Length = 361
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 271 AEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 161
A V++ AG R GG GG V VH AA SP T RH
Sbjct: 17 AASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52
>05_04_0398 - 20946852-20947214
Length = 120
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 487 RHPQRAQLQHAGRREWTTCSNRRWAHR*ARR 579
R QR Q AG T CS+RRW RR
Sbjct: 63 RRKQRPPAQLAGMEIGTACSSRRWPQLLTRR 93
>03_03_0204 +
15436660-15437244,15437355-15437632,15438792-15439068,
15439160-15439405,15440853-15441134
Length = 555
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 426 KLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKS 286
K + P+ + P P ++P P + +PA A+ WR+ K+
Sbjct: 59 KTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKA 105
>02_02_0450 -
10381360-10381391,10381737-10382283,10382770-10382952,
10383123-10383863
Length = 500
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 534 PLPPPSVLKLGALGMALGEFLIANALALRSWLL---LWNKLTLPATPSCSPKPGMRV 373
P PPPS++ L +L +I++ +L WL LW L L P+ K MR+
Sbjct: 302 PWPPPSLVSLTSLASKESNLVISDPESLSVWLSSIDLWGML-LNYYPTIVEKWNMRI 357
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,170,584
Number of Sequences: 37544
Number of extensions: 393779
Number of successful extensions: 1507
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1506
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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