Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K17
(963 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 32 0.70
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 31 1.6
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 31 1.6
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 31 1.6
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 31 1.6
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 31 1.6
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 31 1.6
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 31 1.6
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 6.5
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 8.6
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 432 WNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRAS 328
W K T TPS S KP + P R P P S+ S
Sbjct: 1980 WAKTTTSQTPSTSTKPTVTAPKRSDPIPIAPSQRS 2014
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 434 NNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGSG 535
N + D SA A A + P P P N LGGG G
Sbjct: 114 NGDFDFSA-AIAAASQPKVFPGGPQQNGLGGGGG 146
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 434 NNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGSG 535
N + D SA A A + P P P N LGGG G
Sbjct: 139 NGDFDFSA-AIAAASQPKVFPGGPQQNGLGGGGG 171
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 434 NNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGSG 535
N + D SA A A + P P P N LGGG G
Sbjct: 122 NGDFDFSA-AIAAASQPKVFPGGPQQNGLGGGGG 154
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 434 NNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGSG 535
N + D SA A A + P P P N LGGG G
Sbjct: 135 NGDFDFSA-AIAAASQPKVFPGGPQQNGLGGGGG 167
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 434 NNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGSG 535
N + D SA A A + P P P N LGGG G
Sbjct: 133 NGDFDFSA-AIAAASQPKVFPGGPQQNGLGGGGG 165
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 434 NNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGSG 535
N + D SA A A + P P P N LGGG G
Sbjct: 133 NGDFDFSA-AIAAASQPKVFPGGPQQNGLGGGGG 165
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 434 NNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGSG 535
N + D SA A A + P P P N LGGG G
Sbjct: 114 NGDFDFSA-AIAAASQPKVFPGGPQQNGLGGGGG 146
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -1
Query: 393 PKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTFRAAPEV 214
P P PV+ +P T S A PA+ A + + SA P + S + P T +A+ +
Sbjct: 402 PAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQD 461
Query: 213 P 211
P
Sbjct: 462 P 462
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 453 LRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAA 313
++ W W PA P +P+P + PV P SP +AA
Sbjct: 983 VKKWKPPWEDDDEPAEPVSAPEPEKKTPVLAKKAPAKPRDPSPKKAA 1029
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,334,827
Number of Sequences: 27780
Number of extensions: 283497
Number of successful extensions: 855
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -