Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K12
         (943 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    26   0.43 
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   3.0  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   4.0  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   4.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   9.3  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.43
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = -1

Query: 748 VGLVDXXFSSRWNLFXGFTXVNGTC-QCPWKKXTVNXATAVAGSIWSSLTGVFXWSWS 578
           +G+V   F   W  F      +G C QC W++  V  A    G I S +  V    WS
Sbjct: 337 LGIVMGVFIICWLPFFVVNLWSGFCSQCIWQEKIVFAAVTWLGWINSGMNPVIYACWS 394


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 275 CCCFPCTSLEPVHSPRXEIREILGGGEAQESTH 373
           C C PCTS+E       EI      G    S H
Sbjct: 113 CMCRPCTSVEEYAIIPQEIAGFADEGPFTTSAH 145


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 355 LPSPKDFPYLXPWTVHRLQT 296
           LP PK  P+L  W + ++ T
Sbjct: 204 LPDPKKTPFLISWGIAQVVT 223


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 355 LPSPKDFPYLXPWTVHRLQT 296
           LP PK  P+L  W + ++ T
Sbjct: 204 LPDPKKTPFLISWGIAQVVT 223


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 10/33 (30%), Positives = 11/33 (33%)
 Frame = +2

Query: 803 RPXPXXXPTXWPPXXPPXPPXXXPXXXPPXXXP 901
           +P P   P       PP P    P   PP   P
Sbjct: 24  QPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 425 SRISGRILRNADLIIRMCV 369
           SRIS RI RN  L+   C+
Sbjct: 34  SRISNRISRNRVLLRGQCI 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,855
Number of Sequences: 438
Number of extensions: 5113
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)