Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K11
         (950 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117283-1|AAI17284.1|  676|Homo sapiens cancer susceptibility c...    31   6.2  
BC117281-1|AAI17282.1|  676|Homo sapiens cancer susceptibility c...    31   6.2  
BC057795-1|AAH57795.1|  716|Homo sapiens CASC1 protein protein.        31   6.2  
BC047415-1|AAH47415.2|  676|Homo sapiens CASC1 protein protein.        31   6.2  
AY423543-1|AAQ93499.1|  716|Homo sapiens lung adenoma susceptibi...    31   6.2  

>BC117283-1|AAI17284.1|  676|Homo sapiens cancer susceptibility
           candidate 1 protein.
          Length = 676

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 537 WSRRNLVTEDQTLVFKXRSGMSGDCQHNPIIHRIMF 644
           WS+ NL+     +VFK R  ++ +C  NP    +MF
Sbjct: 570 WSKWNLLCNSTKVVFKVREHLTEECTENPNWALLMF 605


>BC117281-1|AAI17282.1|  676|Homo sapiens cancer susceptibility
           candidate 1 protein.
          Length = 676

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 537 WSRRNLVTEDQTLVFKXRSGMSGDCQHNPIIHRIMF 644
           WS+ NL+     +VFK R  ++ +C  NP    +MF
Sbjct: 570 WSKWNLLCNSTKVVFKVREHLTEECTENPNWALLMF 605


>BC057795-1|AAH57795.1|  716|Homo sapiens CASC1 protein protein.
          Length = 716

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 537 WSRRNLVTEDQTLVFKXRSGMSGDCQHNPIIHRIMF 644
           WS+ NL+     +VFK R  ++ +C  NP    +MF
Sbjct: 610 WSKWNLLCNSTKVVFKVREHLTEECTENPNWALLMF 645


>BC047415-1|AAH47415.2|  676|Homo sapiens CASC1 protein protein.
          Length = 676

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 537 WSRRNLVTEDQTLVFKXRSGMSGDCQHNPIIHRIMF 644
           WS+ NL+     +VFK R  ++ +C  NP    +MF
Sbjct: 570 WSKWNLLCNSTKVVFKVREHLTEECTENPNWALLMF 605


>AY423543-1|AAQ93499.1|  716|Homo sapiens lung adenoma
           susceptibility 1-like protein protein.
          Length = 716

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 537 WSRRNLVTEDQTLVFKXRSGMSGDCQHNPIIHRIMF 644
           WS+ NL+     +VFK R  ++ +C  NP    +MF
Sbjct: 610 WSKWNLLCNSTKVVFKVREHLTEECTENPNWALLMF 645


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,400,146
Number of Sequences: 237096
Number of extensions: 3078174
Number of successful extensions: 6548
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6546
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)