Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K09
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 86 4e-17
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 44 1e-04
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 44 2e-04
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 40 0.004
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 39 0.006
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 38 0.011
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 34 0.18
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 34 0.18
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 33 0.32
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 85.8 bits (203), Expect = 4e-17
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +2
Query: 173 LSSKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRI 352
L+S+ + ++E + NY P+PV + EG + D EG KY DFLSAYSA+ QGHCHP++
Sbjct: 37 LTSEELMRMERERSAHNYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKV 96
Query: 353 IEALKKQXDNLXLVS 397
+ ALK+Q + L L S
Sbjct: 97 LRALKEQAERLTLSS 111
Score = 61.7 bits (143), Expect = 8e-10
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +1
Query: 430 YXKYXT*LXGYDRLVPMNXGVEGGESACXIARIWGYXVHKIPERXPXIISAXGNFWGRPL 609
+ +Y T + GY+ ++PMN G EG E+A + R WGY KIP+ I+S G F GR L
Sbjct: 122 FAEYLTSMFGYEMMLPMNTGAEGVETAIKLVRKWGYEKKKIPKNEALIVSCCGCFHGRTL 181
Query: 610 SAVS 621
+S
Sbjct: 182 GVIS 185
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNL 385
P+ + RSEG +V+D++GKKY D L+ G PR+++A +Q L
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKL 560
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 260 GVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNL 385
G +V+D +G KY D L+ G PR+++A Q + L
Sbjct: 57 GSYVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKL 98
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNL 385
P+ + RSEG +V+D+ GKKY D L+ + G PR+I+A Q + L
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKL 171
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 224 YXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQ 373
Y P+ + + +++D GK+Y D + GHCHP I+ A+ +Q
Sbjct: 84 YYQKPLNIVEGKMQYLYDENGKRYLDCFGGIVTVSCGHCHPDIVNAVVEQ 133
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 38.7 bits (86), Expect = 0.006
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 266 FVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQ 373
+++D +G++Y D + + GHCHP ++EA+ Q
Sbjct: 99 YLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQ 134
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 37.9 bits (84), Expect = 0.011
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNL 385
P+ + + +++D G++Y D + + + GHCHP ++ A+ Q L
Sbjct: 64 PLNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRL 113
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +2
Query: 164 EQNLSSKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCH 343
E + +S+ + + E +Y Y V L G ++D +G++Y D + + GH
Sbjct: 62 ELSAASRAVVEDEARYIVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHAD 121
Query: 344 PRIIEALKKQXDNL 385
P + A+ Q L
Sbjct: 122 PDWVAAVSAQAATL 135
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +2
Query: 164 EQNLSSKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCH 343
E + +S+ + + E +Y Y V L G ++D +G++Y D + + GH
Sbjct: 58 ELSAASRAVVEDEARYIVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHAD 117
Query: 344 PRIIEALKKQXDNL 385
P + A+ Q L
Sbjct: 118 PDWVAAVSAQAATL 131
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 33.1 bits (72), Expect = 0.32
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHC----HPRIIEALKK 370
P+ +G +WDV+G +Y D++ ++ GH + +IE LKK
Sbjct: 86 PIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAALIETLKK 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,748,446
Number of Sequences: 37544
Number of extensions: 270174
Number of successful extensions: 399
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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