Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K09
         (914 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13925| Best HMM Match : No HMM Matches (HMM E-Value=.)              80   2e-15
SB_24775| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.0  
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  

>SB_13925| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 317

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +1

Query: 424 GKYXKYXT*LXGYDRLVPMNXGVEGGESACXIARIWGYXVHKIPERXPXIISAXGNFWGR 603
           G++ ++ T L GYD+++P+N GVEGGE+AC +AR W Y V  +P+    I+ A  NFWGR
Sbjct: 52  GEFQEFVTKLCGYDKVLPVNSGVEGGETACKLARKWAYKVKGVPQNQAKIVFAENNFWGR 111

Query: 604 PLSAVSS 624
            L+A SS
Sbjct: 112 TLAACSS 118



 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 269 VWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNLXLVS 397
           +WDV GK+Y DFL+AYSA+ QGHCHPRI++AL+ Q   L L S
Sbjct: 1   MWDVTGKRYIDFLAAYSAVNQGHCHPRIVKALQDQAGILSLTS 43



 Score = 28.7 bits (61), Expect = 6.9
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 570 DNFCGRKLLGATSIGGXIIHQXHXAXRGFGPXMPGFIXIPYNKXPXLXXXALPDP 734
           +NF GR L   +S      +        +GP MPGF  +PYN    L   ++ DP
Sbjct: 106 NNFWGRTLAACSSSSDPSCYTD------YGPFMPGFELVPYNDLAAL-EKSISDP 153


>SB_24775| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 108

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +2

Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQ 373
           P+    + G +V D + K+Y D++ ++  +  GH HP +++A++ Q
Sbjct: 33  PLFFKHAIGAYVTDEDDKRYVDYVGSWGPMILGHSHPEVLDAVRNQ 78


>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 959

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -1

Query: 539 SYPHIRAXLHALSPPSTPXFIGTRRS-YPXNYV 444
           SYPH    L   SP  T   IGT  + YP NY+
Sbjct: 417 SYPHSTPPLQVFSPTLTSSAIGTTSTGYPSNYL 449


>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1096

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 11/53 (20%), Positives = 26/53 (49%)
 Frame = +1

Query: 400  EHXIPINXGKYXKYXT*LXGYDRLVPMNXGVEGGESACXIARIWGYXVHKIPE 558
            +H +P++  +  +Y         +VP++  V   ES+C ++    + +H + E
Sbjct: 917  QHMVPLDYSQAPRYCDQSMNTQHMVPLDYNVYCSESSCALSLGGDFVLHAVEE 969


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,911,968
Number of Sequences: 59808
Number of extensions: 292622
Number of successful extensions: 366
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)