Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K09
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 109 3e-24
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 109 3e-24
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 102 4e-22
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 46 5e-05
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 39 0.004
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 29 6.1
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 109 bits (262), Expect = 3e-24
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +2
Query: 167 QNLSSKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHP 346
++L+S+ IF E K+GC NY PLPV L + EG FVWDVEGKKY+DFL+AYSA+ QGHCHP
Sbjct: 17 RSLTSQQIFDREKKFGCHNYKPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHP 76
Query: 347 RIIEALKKQXDNLXLVS 397
++++ +++Q L L S
Sbjct: 77 KLLKVVQEQASTLTLTS 93
Score = 68.9 bits (161), Expect = 5e-12
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +1
Query: 424 GKYXKYXT*LXGYDRLVPMNXGVEGGESACXIARIWGYXVHKIPERXPXIISAXGNFWGR 603
G+Y +Y T L YD+++PMN GVE ESA +AR W Y V + + ++ A NFWGR
Sbjct: 102 GEYEEYVTKLFKYDKVLPMNTGVEACESAVKLARRWAYDVKGVKDNEAVVVFAENNFWGR 161
Query: 604 PLSAVSS 624
++A+S+
Sbjct: 162 SIAAISA 168
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 109 bits (262), Expect = 3e-24
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +2
Query: 167 QNLSSKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHP 346
++L+S+ IF E K+GC NY PLPV L + EG FVWDVEGKKY+DFL+AYSA+ QGHCHP
Sbjct: 17 RSLTSQQIFDREKKFGCHNYKPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHP 76
Query: 347 RIIEALKKQXDNLXLVS 397
++++ +++Q L L S
Sbjct: 77 KLLKVVQEQASTLTLTS 93
Score = 68.9 bits (161), Expect = 5e-12
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +1
Query: 424 GKYXKYXT*LXGYDRLVPMNXGVEGGESACXIARIWGYXVHKIPERXPXIISAXGNFWGR 603
G+Y +Y T L YD+++PMN GVE ESA +AR W Y V + + ++ A NFWGR
Sbjct: 102 GEYEEYVTKLFKYDKVLPMNTGVEACESAVKLARRWAYDVKGVKDNEAVVVFAENNFWGR 161
Query: 604 PLSAVSS 624
++A+S+
Sbjct: 162 SIAAISA 168
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 102 bits (244), Expect = 4e-22
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +2
Query: 167 QNLSSKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHP 346
++L+S+ IF E K+GC NY PLPV L + EG FVWDVEGKKY+DFL+AYSA+ QGHCHP
Sbjct: 17 RSLTSQQIFDREKKFGCHNYKPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHP 76
Query: 347 RIIE 358
++++
Sbjct: 77 KLLK 80
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 245 LXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNL 385
+ + E F++D GKKY DF + GHCHP+I AL +Q L
Sbjct: 25 ITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKINAALTEQAQKL 71
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 224 YXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQ 373
Y P + R+ +++D + K+ D +S + GHCHP+++EA+ KQ
Sbjct: 46 YSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHV--GHCHPKVVEAISKQ 93
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 224 YXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQ 373
Y P + R+ +++D + K+ D +S + GHCHP+++EA+ KQ
Sbjct: 46 YSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHV--GHCHPKVVEAISKQ 93
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 252 RHKXTGKGX*FLQPYLSSNWKXSLDDKFCSAII 154
R +G G F+Q +L S W+ +L + C AI+
Sbjct: 147 RSTASGSGSTFVQGFLDSQWRPNLTLEECKAIV 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,528,490
Number of Sequences: 27780
Number of extensions: 222479
Number of successful extensions: 289
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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