Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K09
(914 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 92 5e-19
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p... 40 0.002
At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p... 40 0.003
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm... 39 0.005
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p... 37 0.016
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc... 37 0.021
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas... 35 0.065
At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutas... 31 0.81
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 91.9 bits (218), Expect = 5e-19
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = +2
Query: 176 SSKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRII 355
SS+ + +LE ++ NY P+PV R+ G +WD EGK+Y DFL+AYSA+ QGHCHP+I+
Sbjct: 39 SSQRLMELESEFSAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIM 98
Query: 356 EALKKQXDNLXLVS 397
+AL++Q + L L S
Sbjct: 99 KALQEQVEKLTLSS 112
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +1
Query: 445 T*LXGYDRLVPMNXGVEGGESACXIARIWGYXVHKIPERXPXIISAXGNFWGRPLSAVS 621
T + GYD ++PMN G EG E+A +AR WG+ IP+ I+S G F GR L+ VS
Sbjct: 128 TNMFGYDMVLPMNTGAEGVETALKLARKWGHEKKNIPKDEAIIVSCCGCFHGRTLAIVS 186
>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 481
Score = 40.3 bits (90), Expect = 0.002
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQ 373
P+ + ++ +V+D G++Y D + + GHCHP ++ ++ KQ
Sbjct: 83 PLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQ 128
>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 476
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 221 NYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQ 373
+Y P+ + + +++D G++Y D + + GHCHP I+ A+ +Q
Sbjct: 73 HYYQKPLNIVEGKMQYLYDESGRRYLDAFAGIVTVSCGHCHPDILNAITEQ 123
>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
gamma-amino-N-butyrate transaminase / GABA transaminase
/ beta-alanine--oxoglutarate aminotransferase identical
to gamma-aminobutyrate transaminase subunit precursor
[Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
contains Pfam profile PF00202: aminotransferase, class
III; identical to cDNA gamma-aminobutyrate transaminase
subunit precursor, nuclear gene for mitochondrial
product GI:14030434
Length = 504
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNL 385
P+ + +SEG +V+D GKKY D L+ G PR++ A +Q + L
Sbjct: 70 PLVIAKSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTL 119
>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 477
Score = 37.1 bits (82), Expect = 0.016
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEALKKQXDNL 385
P+ + + +++D G++Y D + + + GHCHP ++E + Q L
Sbjct: 80 PLNIVDGKMQYLFDESGRRYLDAFAGIAVVNCGHCHPDVVEPVINQIKRL 129
>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
mitochondrial, putative / acetylornithine transaminase,
putative / AOTA, putative / ACOAT, putative similar to
SP|O04866 Acetylornithine aminotransferase,
mitochondrial precursor (EC 2.6.1.11) (ACOAT)
(Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
contains Pfam profile PF00202: aminotransferase, class
III
Length = 457
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +2
Query: 179 SKXIFQLEDKYGCRNYXPLPVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIE 358
S+ + + E K Y PV L +G ++D EGK+Y D S + GH P +
Sbjct: 58 SQKVIEEEAKVIVGTYARAPVVLSSGKGCKLFDPEGKEYLDCASGIAVNALGHGDPDWLR 117
Query: 359 ALKKQXDNLXLVS 397
A+ +Q L VS
Sbjct: 118 AVTEQAGVLAHVS 130
>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
(GSA 1) / glutamate-1-semialdehyde aminotransferase 1
(GSA-AT 1) identical to GSA 1 [SP|P42799]
Length = 474
Score = 35.1 bits (77), Expect = 0.065
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEAL 364
PV + +G +WD++G +Y D++ ++ GH ++ AL
Sbjct: 82 PVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAAL 124
>At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutase 2
(GSA 2) / glutamate-1-semialdehyde aminotransferase 2
(GSA-AT 2) identical to GSA2 [SP|Q42522]
Length = 472
Score = 31.5 bits (68), Expect = 0.81
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 236 PVXLXRSEGVFVWDVEGKKYYDFLSAYSAIXQGHCHPRIIEAL 364
PV + ++G + D++G +Y D++ ++ GH ++ AL
Sbjct: 80 PVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEVLAAL 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,745,107
Number of Sequences: 28952
Number of extensions: 208067
Number of successful extensions: 304
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2168774904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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