Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K08
(914 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 32 3.3
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 32 3.3
BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 32 3.3
BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 32 3.3
BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 32 3.3
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 32 3.3
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 32 3.3
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 32 3.3
AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 32 3.3
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 31 4.4
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 31 5.8
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 31 5.8
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 31 5.8
Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated ph... 31 7.7
X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated ph... 31 7.7
BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated ... 31 7.7
BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated ... 31 7.7
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 7.7
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHP-PXXXRPPXXXXXXXXXXXXXXXXPXXXXXPXXXXPPP 900
PP PP G PPPP P +PP P P PPP
Sbjct: 261 PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPP 318
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP G PPPP PP RPP
Sbjct: 305 PPPGPPPPQQGPPPPPGPFPP---RPP 328
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHP-PXXXRPPXXXXXXXXXXXXXXXXPXXXXXPXXXXPPP 900
PP PP G PPPP P +PP P P PPP
Sbjct: 261 PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPP 318
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP G PPPP PP RPP
Sbjct: 305 PPPGPPPPQQGPPPPPGPFPP---RPP 328
>BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 730 PPXXXPPXXGG-XPPPPXXHPPXXXRPP 810
PP PP GG PPPP PP PP
Sbjct: 550 PPPPPPPLPGGMLPPPPPPLPPGGPPPP 577
>BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 730 PPXXXPPXXGG-XPPPPXXHPPXXXRPP 810
PP PP GG PPPP PP PP
Sbjct: 550 PPPPPPPLPGGMLPPPPPPLPPGGPPPP 577
>BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled
associated activator of morphogenesis 2 protein.
Length = 662
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 730 PPXXXPPXXGG-XPPPPXXHPPXXXRPP 810
PP PP GG PPPP PP PP
Sbjct: 144 PPPPPPPLPGGMLPPPPPPLPPGGPPPP 171
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHP-PXXXRPPXXXXXXXXXXXXXXXXPXXXXXPXXXXPPP 900
PP PP G PPPP P +PP P P PPP
Sbjct: 188 PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPP 245
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP G PPPP PP RPP
Sbjct: 232 PPPGPPPPQQGPPPPPGPFPP---RPP 255
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHP-PXXXRPPXXXXXXXXXXXXXXXXPXXXXXPXXXXPPP 900
PP PP G PPPP P +PP P P PPP
Sbjct: 298 PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPP 355
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP G PPPP PP RPP
Sbjct: 342 PPPGPPPPQQGPPPPPGPFPP---RPP 365
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHP-PXXXRPPXXXXXXXXXXXXXXXXPXXXXXPXXXXPPP 900
PP PP G PPPP P +PP P P PPP
Sbjct: 261 PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPP 318
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP G PPPP PP RPP
Sbjct: 305 PPPGPPPPQQGPPPPPGPFPP---RPP 328
>AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein.
Length = 1085
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 730 PPXXXPPXXGG-XPPPPXXHPPXXXRPP 810
PP PP GG PPPP PP PP
Sbjct: 557 PPPPPPPLPGGMLPPPPPPLPPGGPPPP 584
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 31.5 bits (68), Expect = 4.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP G PPPP + P PP
Sbjct: 325 PPPAIPPPTPGYPPPPPTYNPNFPPPP 351
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP G PPPP +P PP
Sbjct: 326 PPAIPPPTPGYPPPPPTYNPNFPPPPP 352
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP P G PPPP PP PP
Sbjct: 380 PPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP P G PPPP PP PP
Sbjct: 380 PPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP P G PPPP PP PP
Sbjct: 380 PPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein (VASP) protein.
Length = 380
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRP 807
PP PP G PPPP PP P
Sbjct: 165 PPAGGPPPPPGPPPPPGPPPPPGLPP 190
>X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 378
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRP 807
PP PP G PPPP PP P
Sbjct: 163 PPAGGPPPPPGPPPPPGPPPPPGLPP 188
>BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRP 807
PP PP G PPPP PP P
Sbjct: 165 PPAGGPPPPPGPPPPPGPPPPPGLPP 190
>BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRP 807
PP PP G PPPP PP P
Sbjct: 166 PPAGGPPPPPGPPPPPGPPPPPGLPP 191
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 730 PPXXXPPXXGGXPPPPXXHPPXXXRPP 810
PP PP PPPP PP PP
Sbjct: 1994 PPTPPPPPPPPPPPPPPPPPPPPSAPP 2020
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,272,550
Number of Sequences: 237096
Number of extensions: 1708173
Number of successful extensions: 8780
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7524
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -