Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K07
(863 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48345| Best HMM Match : Ribosomal_L22 (HMM E-Value=0) 116 2e-26
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 36 0.032
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 35 0.074
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 33 0.30
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.33
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 2.8
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 30 2.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 2.8
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 3.7
SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10) 29 3.7
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 3.7
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 4.9
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 28 8.5
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 28 8.5
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 28 8.5
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_48345| Best HMM Match : Ribosomal_L22 (HMM E-Value=0)
Length = 142
Score = 116 bits (280), Expect = 2e-26
Identities = 63/140 (45%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Frame = +1
Query: 85 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 264
M RY+ +P+NP KSCKARGSNLRVH+KNT+E AMAI+ M +R+A RYLK+V KK+ +PF
Sbjct: 1 MTRYATDPENPTKSCKARGSNLRVHYKNTHEAAMAIKGMHVRKANRYLKDVCAKKQLVPF 60
Query: 265 RRFNGGVGRCAQAKQFGT--TQGSLAQEIRRIPLAVIEER*IKX*QQNFGR*XAXHXPHS 438
R++NGGVGR AQAK +QG ++ I L +++ + + H
Sbjct: 61 RKYNGGVGRKAQAKNLKVPGSQGRWPKKSAEILLQLLKNAESNAEFKGLDV-DSLVVEHI 119
Query: 439 GKSXRPWLSKRKYRGPGRIN 498
+ P + +R YR GRIN
Sbjct: 120 QVNEAPSMRRRTYRAHGRIN 139
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 36.3 bits (80), Expect = 0.032
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKPXXXPX 849
PP P PP P P PP P PPPPP P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 850 AP 855
P
Sbjct: 428 PP 429
Score = 36.3 bits (80), Expect = 0.032
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKPXXXPX 849
PP P PP P P PP P PPPPP P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 850 AP 855
P
Sbjct: 429 PP 430
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 664 SXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKPXXX 843
S PP P P P P PP P PPPPP P
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Query: 844 PXAP 855
P P
Sbjct: 424 PPPP 427
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = +1
Query: 652 SXXFSXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXK 831
S + P P PP P P PP P PPPPP
Sbjct: 358 SAGINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Query: 832 PXXXPXAP 855
P P P
Sbjct: 418 PAPPPPPP 425
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKPXXXPX 849
PP P + PP P P PP P PPPP P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 850 AP 855
P
Sbjct: 430 PP 431
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/75 (25%), Positives = 20/75 (26%)
Frame = +1
Query: 631 IXGIPXGSXXFSXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPP 810
+ I G PP P P P P PP P PP
Sbjct: 354 VTDISAGINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Query: 811 PPPXXXKPXXXPXAP 855
PPP P P P
Sbjct: 414 PPPPPAPPPPPPPPP 428
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKPXXXPX 849
PP P PP P P PP P PPP P P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Query: 850 AP 855
P
Sbjct: 431 PP 432
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 664 SXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKPXXX 843
S PP P PP P P PP P PPPPP
Sbjct: 377 SPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRL 436
Query: 844 PXAP 855
AP
Sbjct: 437 ACAP 440
Score = 32.3 bits (70), Expect = 0.52
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKPXXXPX 849
PP P PP P P PP P P PPP P P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Query: 850 A 852
A
Sbjct: 433 A 433
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 769 PXXXXPPXXPGXPPPPPXXXKPXXXPXAPQ 858
P PP P PPPP P P PQ
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQ 394
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAPQH 861
P P PP P PPPPP P P P H
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPPPTPLH 498
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPPP P P P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 768 PXPXXPPXXAGXXPPPPXXXQTXXXPXXPPT 860
P P PP PPPP P PPT
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPPPPPT 495
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPPP P P P
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPP 234
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.3 bits (60), Expect(2) = 0.33
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPP 819
P P PP P PPPPP
Sbjct: 102 PPPPPPPPPPPPPPPPPPP 120
Score = 23.4 bits (48), Expect(2) = 0.33
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 796 PGXPPPPPXXXKPXXXP 846
P PPPPP P P
Sbjct: 136 PAPPPPPPPPPAPCMPP 152
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPPP P AP
Sbjct: 692 PPPPPPPPPPQPSTPPPPPPSTPPVQQSGAP 722
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXP 846
P P PP P PPPPP P P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPP 710
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPP P P P
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTPPPPPPSTP 714
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 784 PPXXPGXPPPPPXXXKPXXXPXAP 855
PP P PPPPP P P P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTP 706
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +1
Query: 643 PXGSXXFSXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPX 822
P G S PP P PP P P PP P PPPPP
Sbjct: 936 PPGGSAPSQPPPPGGNAPPPPPPPGGSAP-PPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
Query: 823 XXK 831
K
Sbjct: 995 MRK 997
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = +1
Query: 649 GSXXFSXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXP---GXPPPPP 819
G + PP P PP P P PP P G PPPPP
Sbjct: 340 GGGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPP 399
Query: 820 XXXKPXXXP 846
P P
Sbjct: 400 PTNGPPPPP 408
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXP---GXPPPPPXXXKP 834
PP P T PP P P PP P G PPPPP P
Sbjct: 357 PPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 414
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P PP PPPP QT P PP
Sbjct: 960 PPIPATQVPPPPLPPLPPPPPPVQTTTAPTLPP 992
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP P PPPPP P
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPPPPPP 1183
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 784 PPXXPGXPPPPPXXXKPXXXPXAP 855
PP P PPPPP P P P
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPP 1180
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXP 846
P P PP P P PPP P P
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPPP 1184
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPP P P P P
Sbjct: 191 PNPPYPPPPNAPNPPPPNPPYPPPPNAPNPP 221
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPP P P P P
Sbjct: 96 PPPYPPYPPPPPYPPPPNPPYPPPPNAPYPP 126
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPP P P P
Sbjct: 103 PPPPPYPPPPNPPYPPPPNAPYPPPPNPPYP 133
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPP P P P P
Sbjct: 112 PNPPYPPPPNAPYPPPPNPPYPPPPNAPYPP 142
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/84 (22%), Positives = 21/84 (25%)
Frame = +3
Query: 567 YPLLMMPXXKNXPKKTWAXXXNXRDPXRXXXIFPPPXXXXXXXXXXXXXXXXXXXXXXXP 746
YP P P + N P +PPP P
Sbjct: 124 YPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPP 183
Query: 747 XXXXPXXPXPXXPPXXAGXXPPPP 818
P P P PP PPPP
Sbjct: 184 NPPYPPPPNPPYPPPPNAPNPPPP 207
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPP P P P P
Sbjct: 175 PPPPYPPPPNPPYPPPPNPPYPPPPNAPNPP 205
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPP-PPXXXKPXXXPXAPQH 861
P P PP P PPP PP P P P +
Sbjct: 162 PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPY 195
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 768 PXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P PP G PPPP P PP
Sbjct: 676 PPPPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXA 852
P P PP P PPPP P P A
Sbjct: 226 PPPAAPAPPPPPAAAPPPPPPPPPVKKPAA 255
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 784 PPXXPGXPPPPPXXXKPXXXPXAP 855
PP P PPPPP P P P
Sbjct: 1307 PPESPPPPPPPPPPPPPPPLPPTP 1330
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 768 PXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P G PPPP T P PP
Sbjct: 140 PPPPIAPATGGPPPPPPIAPATGGPPPPPP 169
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPPP P P
Sbjct: 189 PPPSGGPPPPPPPPPPPPPPPILELAAPPPP 219
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P P PPPP T P PP
Sbjct: 124 PSPPPPPTSPATRAPPPPPPIAPATGGPPPPPP 156
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPP 819
P P PP P PPPPP
Sbjct: 188 PPPPSGGPPPPPPPPPPPP 206
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP P PPPPP P
Sbjct: 860 PRPRPRRPPPPPPPPPPPPPPPPP 883
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP P PPPPP P
Sbjct: 862 PRPRRPPPPPPPPPPPPPPPPPPP 885
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 784 PPXXPGXPPPPPXXXKPXXXPXAP 855
PP P PPPPP P P P
Sbjct: 55 PPPPPPPPPPPPPPPPPSSSPSRP 78
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +1
Query: 673 PXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP P P PP G PPPPP P
Sbjct: 710 PMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPPIDVP 763
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P PP PPPP Q PP
Sbjct: 710 PMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPP 742
>SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)
Length = 798
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 366 NCKRNSADFLGQRPLCCAKLLCLS 295
+CK+N + LGQ+ +CC ++ CLS
Sbjct: 712 SCKQNIS-LLGQKCVCCTRVFCLS 734
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPPP P P
Sbjct: 307 PPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 744 PXXXXPXXPXPXXPPXXAGXXPPPP 818
P P P P PP G PPPP
Sbjct: 310 PGGAPPPPPPPPPPPPGDGGAPPPP 334
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPP 818
P P P PP G PPPP
Sbjct: 316 PPPPPPPPPPGDGGAPPPPP 335
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 744 PXXXXPXXPXPXXPPXXAGXXPPPP 818
P P P P PP G PPPP
Sbjct: 190 PMAGMPPPPPPPPPPGFPGGAPPPP 214
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP PG PPPP P P P
Sbjct: 196 PPPPPPPPPGFPGGAPPPP--PPPFGAPPPP 224
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P P PP P PPPP P AP
Sbjct: 96 PPPATPPPPTMPPTPPPPQTPAPPGPDTPAP 126
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 769 PXXXXPPXXPGXPPPPPXXXKPXXXPXAPQH 861
P PP P PPPP P AP H
Sbjct: 81 PPAAPPPPPPLPAPPPPPAQPAPQPPPAPPH 111
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPP 819
P P PP P PPPPP
Sbjct: 73 PPPLCAPPPPPPPPPPPPP 91
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 784 PPXXPGXPPPPPXXXKP 834
PP P PPPPP KP
Sbjct: 82 PPPPPPPPPPPPGAKKP 98
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPP 819
P P PP P PPPPP
Sbjct: 274 PPPLCAPPPPPPPPPPPPP 292
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 784 PPXXPGXPPPPPXXXKP 834
PP P PPPPP KP
Sbjct: 283 PPPPPPPPPPPPGAKKP 299
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 769 PXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P PP P PP PP P P P
Sbjct: 178 PPAPPPPGAPAAPPAPPFGGPPSAPPPPP 206
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXK--PXXXPXAP 855
P P PP G PPPPP + P P P
Sbjct: 378 PPPIEGRPPSSLGNPPPPPPPGRGAPPPGPMIP 410
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPP 816
PP P PP P P PP G PPPP
Sbjct: 459 PPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPRGMPPPP 507
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,316,206
Number of Sequences: 59808
Number of extensions: 435624
Number of successful extensions: 2398
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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