Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K07
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal pro... 134 1e-31
AC025721-5|AAL32251.1| 159|Caenorhabditis elegans Ribosomal pro... 93 2e-19
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL132948-36|CAD57707.2| 186|Caenorhabditis elegans Hypothetical... 30 1.9
AF324054-1|AAK01415.1| 162|Caenorhabditis elegans Ly-6-related ... 30 1.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.7
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 7.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.5
AC006794-5|AAK68502.1| 821|Caenorhabditis elegans Hypothetical ... 28 7.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 28 9.9
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 9.9
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 28 9.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 9.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 9.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 9.9
>AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 17, isoform a protein.
Length = 187
Score = 134 bits (323), Expect = 1e-31
Identities = 71/146 (48%), Positives = 87/146 (59%)
Frame = +1
Query: 94 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 273
YSR P+N KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF
Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Query: 274 NGGVGRCAQAKQFGTTQGSLAQEIRRIPLAVIEER*IKX*QQNFGR*XAXHXPHSGKSXR 453
+GG+GR AQ KQ+ TTQG + L +++ + H
Sbjct: 66 HGGIGRAAQTKQWNTTQGRWPVKSADFLLDLLKNAESNAEYKGLDV-DHLVIEHINVQRA 124
Query: 454 PWLSKRKYRGPGRINPYMSXPCXXXV 531
L +R YR GRINPYMS PC V
Sbjct: 125 AKLRRRTYRAHGRINPYMSSPCHIEV 150
Score = 62.1 bits (144), Expect = 5e-10
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2
Query: 323 RGRWPKKSAEFLLQLLRNAESNXDNKTLDVDXLVIXXIQVNRAA 454
+GRWP KSA+FLL LL+NAESN + K LDVD LVI I V RAA
Sbjct: 82 QGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAA 125
>AC025721-5|AAL32251.1| 159|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 17, isoform b protein.
Length = 159
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1
Query: 94 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 273
YSR P+N KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF
Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 359 LQLLRNAESNXDNKTLDVDXLVIXXIQVNRAA 454
L LL+NAESN + K LDVD LVI I V RAA
Sbjct: 66 LDLLKNAESNAEYKGLDVDHLVIEHINVQRAA 97
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1
Query: 460 LSKRKYRGPGRINPYMSXPCXXXV 531
L +R YR GRINPYMS PC V
Sbjct: 99 LRRRTYRAHGRINPYMSSPCHIEV 122
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -1
Query: 860 CWGAXGXXXGLXXXGGGGGXPGXXGGXXXXGXGXXXXXXXXXXTXXXXXXXXGGXXVXXX 681
C G G G GGGGG G GG G G GG
Sbjct: 122 CGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 181
Query: 680 GXGG 669
G GG
Sbjct: 182 GGGG 185
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -1
Query: 860 CWGAXGXXXGLXXXGGGGGXPGXXGGXXXXGXGXXXXXXXXXXTXXXXXXXXGGXXVXXX 681
C G G G GGGGG G GG G G GG
Sbjct: 72 CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG 131
Query: 680 GXGG 669
G GG
Sbjct: 132 GCGG 135
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 862 CVGGXXGXXXVCXXXGGGGXXPAXXGGXXGXG 767
C GG G C GGGG GG G G
Sbjct: 122 CGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 664 SXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPP 819
S PP P PP V P P PP G PPPPP
Sbjct: 763 SIPPPPPPPP--PPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 664 SXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPP 819
S PP P PP V P P PP G PPPPP
Sbjct: 763 SIPPPPPPPP--PPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
>AL132948-36|CAD57707.2| 186|Caenorhabditis elegans Hypothetical
protein Y39B6A.48 protein.
Length = 186
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -3
Query: 267 TEWN---TLFLFNHVF--EVTNSTTERHLPDCHCGLICVLKVNTEV*TTRFAGFRRVIR- 106
T W T +++ VF + +ER +P CG +CV + +V F GF+ +
Sbjct: 58 TSWKYLQTTYIYPKVFTDRCRDPNSERGMPTVMCGSVCVSLMEPDVEAGVFIGFKHIRGC 117
Query: 105 LPRVTTH 85
L RV H
Sbjct: 118 LDRVLRH 124
>AF324054-1|AAK01415.1| 162|Caenorhabditis elegans Ly-6-related
protein HOT-2 protein.
Length = 162
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -3
Query: 267 TEWN---TLFLFNHVF--EVTNSTTERHLPDCHCGLICVLKVNTEV*TTRFAGFRRVIR- 106
T W T +++ VF + +ER +P CG +CV + +V F GF+ +
Sbjct: 21 TSWKYLQTTYIYPKVFTDRCRDPNSERGMPTVMCGSVCVSLMEPDVEAGVFIGFKHIRGC 80
Query: 105 LPRVTTH 85
L RV H
Sbjct: 81 LDRVLRH 87
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -1
Query: 860 CWGAXGXXXGLXXXGGGGGXPGXXGGXXXXGXGXXXXXXXXXXTXXXXXXXXGGXXVXXX 681
C G G G GGGGG G GG G G GG
Sbjct: 97 CGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCG 156
Query: 680 GXGG 669
G GG
Sbjct: 157 GGGG 160
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 860 CWGAXGXXXGLXXXGGGGGXPGXXGGXXXXGXG 762
C G G G GGGGG G GG G G
Sbjct: 90 CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -1
Query: 860 CWGAXGXXXGLXXXGGGGGXPGXXGGXXXXGXGXXXXXXXXXXTXXXXXXXXGGXXVXXX 681
C G G G GGGGG G GG G G GG
Sbjct: 97 CGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCG 156
Query: 680 GXGG 669
G GG
Sbjct: 157 GGGG 160
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 860 CWGAXGXXXGLXXXGGGGGXPGXXGGXXXXGXG 762
C G G G GGGGG G GG G G
Sbjct: 90 CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAPQH 861
P PP P PPPPP P P P +
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSY 84
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P P +G PPPP P PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPP 819
P P PP G PPPPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPP 594
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 796 PGXPPPPPXXXKPXXXPXAP 855
P PPPPP P P P
Sbjct: 577 PPPPPPPPMLGGPPPPPPPP 596
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 769 PXXXXPPXXPGXPPPPP 819
P PP PPPPP
Sbjct: 530 PPRPAPPPVSSIPPPPP 546
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXK-PXXXPXAP 855
P P PP G PPPPP + P P P
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 784 PPXXPGXPPPPP 819
PP PG PPPPP
Sbjct: 310 PPGMPGMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXK-PXXXPXAP 855
P P PP G PPPPP + P P P
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 784 PPXXPGXPPPPP 819
PP PG PPPPP
Sbjct: 320 PPGMPGMPPPPP 331
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAPQ 858
P P PP P PPPPP AP+
Sbjct: 135 PPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPR 166
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 769 PXXXXPPXXPGXPPPPPXXXKPXXXPXAP 855
P PP P PPPPP P P AP
Sbjct: 129 PRTCCPPPTPAAPPPPP--PPPPPAPEAP 155
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP G PPPPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP 736
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP G PPPPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLP 752
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P PP G PPPP P PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P P +G PPPP P PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP G PPPPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP 736
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP G PPPPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLP 752
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P PP G PPPP P PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P P +G PPPP P PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P P P PPPPP KP
Sbjct: 160 PPPPVSVPSSKPTPPPPPPAQQKP 183
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P P P PPPPP KP
Sbjct: 160 PPPPVSVPSSKPTPPPPPPAQQKP 183
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP G PPPPP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLP 319
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKP 834
P P PP G PPPPP P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLP 335
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P PP G PPPP P PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 759 PXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P P +G PPPP P PP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
protein R134.1 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 384 DSAFLNNCKRNSADFLGQRPLCCAKLLCL-STATNAAVEATE-WNTLFLFNHVFEVTNST 211
D A+L+ +RN + + PL C+ + C+ STAT A ++ ++L+ NST
Sbjct: 328 DKAYLDYMQRNILNVVKLPPLNCSTVDCVSSTATGMGAYARHLFDVVYLYGIALTRVNST 387
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXPXAPQ 858
P P PP PPPPP P P P+
Sbjct: 59 PCPAQFCPPPPICPPPPPPPMPCPPPPPPMPR 90
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPP 819
PP P T PP P P PP G PPPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPP----PPKGTGTPPPPP 78
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPP 819
PP P T PP P P PP G PPPPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPP----PPKGTGSPPPPP 141
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPP 819
PP P T PP P P PP G PPPPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPP----PPKGTGSPPPPP 172
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXPGXPPPPP 819
PP P T PP P P PP G PPPPP
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPP----PPKGTGTPPPPP 203
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXP 846
P P PP G PPPP P P
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXP 846
P P PP G PPPP P P
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 763 PXPXXXXPPXXPGXPPPPPXXXKPXXXP 846
P P PP G PPPP P P
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>AC006794-5|AAK68502.1| 821|Caenorhabditis elegans Hypothetical
protein Y50D4A.1 protein.
Length = 821
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 345 DFLGQRPLCCAKLLCLSTATNAAVEATEWNTL 250
D L RP C K+ +S T++ +E EW+ L
Sbjct: 120 DGLPHRPACTIKMRAISMMTSSFMENLEWSRL 151
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/68 (26%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Frame = +1
Query: 661 FSXPPXPXXXTXXPPXXXXXXXXVXXXXXXXXXXPXPXXXXPPXXP--GXPPPPPXXXKP 834
F PP P PP P PP P G PPPPP
Sbjct: 64 FIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGL 123
Query: 835 XXXPXAPQ 858
P P+
Sbjct: 124 GVAPQPPR 131
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 744 PXXXXPXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P P PP AG PP P + P PP
Sbjct: 129 PITPPPCKPCPEGPPGPAG--PPGPQGNKGPLGPPGPP 164
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 769 PXXXXPPXXPGXPPPPPXXXKPXXXP 846
P PP P PPPPP K P
Sbjct: 812 PIASNPPPPPPLPPPPPSVEKKKLEP 837
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 744 PXXXXPXXPXPXXPPXXAGXXPPPPXXXQTXXXPXXPP 857
P P P P PP AG PP P + P PP
Sbjct: 131 PLTPPPCKPCPEGPPGPAG--PPGPDGNKGPLGPPGPP 166
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 769 PXXXXPPXXPGXPPPPPXXXKPXXXP 846
P PP P PPPPP K P
Sbjct: 812 PIASNPPPPPPLPPPPPSVEKKKLEP 837
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 768 PXPXXPPXXAGXXPPPP 818
P P PP AG PPPP
Sbjct: 235 PPPPLPPVGAGAPPPPP 251
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 768 PXPXXPPXXAGXXPPPP 818
P P PP AG PPPP
Sbjct: 221 PPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 768 PXPXXPPXXAGXXPPPP 818
P P PP AG PPPP
Sbjct: 221 PPPPLPPVGAGAPPPPP 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,350,426
Number of Sequences: 27780
Number of extensions: 338805
Number of successful extensions: 2025
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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