Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K05
(1014 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.20
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 31 0.34
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 2.4
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 4.2
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.20
Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = +1
Query: 772 PLPXTXPXPXLXEXALPTPXVSWXRPTGXPPPXPXXXFLXPXXPXXP-APPXSXXXXXXP 948
P+P T P + P P S P+ PPP P P P APP P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSA-PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Query: 949 XPXXXXPPXTPHPPXP 996
P P PP P
Sbjct: 1094 VP----KPSVAAPPVP 1105
Score = 29.5 bits (63), Expect = 0.79
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 772 PLPXTXPXPXLXEXALPTPXVSWXRPTGXPPPXPXXXFLXPXXPXXPAPPXSXXXXXXPX 951
P+P P + + ++ P V +G PP + P P APP P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVP-APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP- 1208
Query: 952 PXXXXPPXTPHPPXPT 999
PP + PP PT
Sbjct: 1209 ---PVPPPSTAPPVPT 1221
Score = 27.5 bits (58), Expect = 3.2
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Frame = +1
Query: 790 PXPXLXEXALPTPXVSWXRPTGXP---PPXPXXXFLXPXXPXXPAPPXSXXXXXXPXPXX 960
P P A P P S P P PP P P P P P S P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP-PPVPAPSSEIPSIPAPSG 1081
Query: 961 XXPPXTPH--PPXP 996
P P PP P
Sbjct: 1082 APPVPAPSGIPPVP 1095
Score = 26.2 bits (55), Expect = 7.4
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = +1
Query: 772 PLPXTXPXPXLXEXALPTPXVSWXRPTGXPPPXPXXXFLXP---XXPXXPAPPXSXXXXX 942
PL P P L A P P P+ PP P P P P S
Sbjct: 1007 PLARVPPVPKLSSKAPPVPL-----PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPS 1061
Query: 943 XPXPXXXXPPXTPHPPXPT 999
P P P P P+
Sbjct: 1062 APPPVPAPSSEIPSIPAPS 1080
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 30.7 bits (66), Expect = 0.34
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 775 LPXTXPXPXLXEXALPTPXVSWXRPTGXPPPXPXXXFLXPXXPXXP 912
L T P +PTP V RP PPP P + P P P
Sbjct: 332 LRQTTTTPFAGNQVMPTPQVQGSRPP-PPPPMPAPIYNVPNVPTVP 376
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Frame = +1
Query: 847 PTGXPPPXPXXXFLXPXX-PXXPAPPXSXXXXXXPXPXXXXPPXTPHPPXP 996
P PP P P P PP S P PP P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +1
Query: 778 PXTXPXPXLXEXALPTPXVSWXRPTGXPPPXPXXXFLXPXXPXXPAPPXSXXXXXXPXPX 957
P + P P + L P + RP+ PPP P P P P S P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPS-IPPPSPAS--APPIPSKAPPIPSSLPPPAQPAAP 180
Query: 958 XXXPPXTPHPP 990
PP P P
Sbjct: 181 VKSPPSAPSLP 191
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 847 PTGXPPPXPXXXFLXPXXPXXPAPP 921
P PPP P F P P P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Frame = +1
Query: 775 LPXTXPXPXLXEX-ALPTPXVSWXRPTGXPPPXPXXXFLXPXXPXXPAPPXSXXXXXXP- 948
+P P + E ++P P V+ P P P + P P P PP + P
Sbjct: 559 VPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPS 618
Query: 949 XPXXXXPPXTPHPP 990
P P P P
Sbjct: 619 VPQRPAVPVVPEAP 632
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -2
Query: 989 GGWGVXGGXXXXGXGXXXXXXEXGGAGXXGXXGXRNXXXGXGGGKPVGRXXETXGVGRA 813
G G GG G GGA G G R G GG + GR + G G A
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG-GRGGSSGGRGGA 67
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 4.2
Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Frame = +1
Query: 772 PLPXTXPXPXLXEXALPTPXVSWXRPTGXP--PPXPXXXFLXPXXPX-XPAPPXSXXXXX 942
P+P P +LP P P G P PP P + P P PA P
Sbjct: 416 PVPTPPSLPPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 943 XPXPXXXXPPXTP 981
P P P P
Sbjct: 475 APPPAPAPAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 859 PPPXPXXXFLXPXXPXXPAPPXSXXXXXXPXPXXXXPPXTPHPP 990
PPP P P P PP P P PP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPP--------PAPIMGGPPPPPPPP 768
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,559,372
Number of Sequences: 5004
Number of extensions: 15492
Number of successful extensions: 59
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 527257104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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