Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_K04
(994 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 37 0.019
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 34 0.14
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 34 0.14
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 34 0.18
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 34 0.18
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.32
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.32
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 33 0.42
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.55
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.55
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.55
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 32 0.55
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.73
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.73
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.73
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.73
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.3
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.3
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 26 1.3
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 27 1.5
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 27 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.2
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 26 3.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.9
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 3.9
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 3.9
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.9
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 5.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 5.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 24 7.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 24 7.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXPXXSX 979
G P P PP P PLP P P PP P P P + PP P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPP--PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPS 83
Query: 980 XXP 988
P
Sbjct: 84 YSP 86
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 785 RLXPSGSPXXPXAPPAXXIPXPLPLTPRXXPG-XPPPXXXXPXXXPXXXXPXXXXLXPPX 961
R PSG P PA P+ PR PG PPP P P L P
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTR 816
Query: 962 XPXXSXXXP 988
P S P
Sbjct: 817 VPTPSNGAP 825
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 785 RLXPSGSPXXPXAPPAXXIPXPLPLTPRXXPG-XPPPXXXXPXXXPXXXXPXXXXLXPPX 961
R PSG P PA P+ PR PG PPP P P L P
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTR 816
Query: 962 XPXXSXXXP 988
P S P
Sbjct: 817 VPTPSNGAP 825
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +2
Query: 785 RLXPSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXX 964
R PSG P PA P+ PR PG PPP P P + PP
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP---PPGAPGGGGGMYPPLI 813
Query: 965 P 967
P
Sbjct: 814 P 814
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +2
Query: 785 RLXPSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXX 964
R PSG P PA P+ PR PG PPP P P + PP
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP---PPGAPGGGGGMYPPLI 813
Query: 965 P 967
P
Sbjct: 814 P 814
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 806 PXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXPXXSXXX 985
P P P +P P+P TP P PPP P P PP P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPP 320
Query: 986 P 988
P
Sbjct: 321 P 321
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXP 967
P +P P P + P P P P PG P P P P PP P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXP 967
PS +P P PP + P P P PPP P P P + PP P
Sbjct: 268 PSVTPMPPPMPPTPGM-TPRPPPPPSSGMWPPPPPPPPGRTP--GPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 806 PXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXPXXSXXX 985
P P P +P P+P TP P PPP P P PP P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPP 330
Query: 986 P 988
P
Sbjct: 331 P 331
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXP 967
P +P P P + P P P P PG P P P P PP P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXP 967
PS +P P PP + P P P PPP P P P + PP P
Sbjct: 278 PSVTPMPPPMPPTPGM-TPRPPPPPSSGMWPPPPPPPPGRTP--GPPGMPGMPPPPPP 332
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 32.7 bits (71), Expect = 0.42
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG GG G GGG GG
Sbjct: 787 GGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGG 828
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 962 GXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGGXVXPVEPXGXAG 804
G GGGG GG GG G GGG G + G AG
Sbjct: 798 GGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAG 850
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGGXVXPVEPXGXAGN 801
G GGGG GG GG G GG GG G GN
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGN 838
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGG-GXGGXVXPVEPXGXAGN 801
GG GGGG GG G G GG G GG AGN
Sbjct: 798 GGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGN 853
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 797 SGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPP 892
SG P P PP P P P P G PPP
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXPXX 973
P G P PP P LP P PPP P P P PP P
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-PPPPPPPPGGFKGGPPPPPPP 790
Query: 974 SXXXP 988
P
Sbjct: 791 GMFAP 795
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXP-XXXPXXXXPXXXXLXPPXXP 967
P G P PP P LP P PPP P P P PP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 797 SGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPP 892
SG P P PP P P P P G PPP
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXPXX 973
P G P PP P LP P PPP P P P PP P
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-PPPPPPPPGGFKGGPPPPPPP 790
Query: 974 SXXXP 988
P
Sbjct: 791 GMFAP 795
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXP-XXXPXXXXPXXXXLXPPXXP 967
P G P PP P LP P PPP P P P PP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 797 SGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPP 892
SG P P PP P P P P G PPP
Sbjct: 338 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPPXXPXX 973
P G P PP P LP P PPP P P P PP P
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-PPPPPPPPGGFKGGPPPPPPP 373
Query: 974 SXXXP 988
P
Sbjct: 374 GMFAP 378
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXP-XXXPXXXXPXXXXLXPPXXP 967
P G P PP P LP P PPP P P P PP P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 794 PSGSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXP 907
P G P P PP P P P P P PPP P
Sbjct: 119 PGGVPAPPN-PPRTCCPPPTPAAPPPPPPPPPPAPEAP 155
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG GG G GGG GG
Sbjct: 132 GGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGG 173
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGGXVXPVEPXGXAG 804
GG GGGG GG GG G GG G V P G G
Sbjct: 161 GGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGG 214
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 962 GXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
G GGGG GG GG G GGG GG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGG 165
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGGXVXPVEPXGXAG 804
G GGGG GG GG G GGG GG G G
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGG GG GG G GGG GG
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG GG G GGG GG
Sbjct: 132 GGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGG 173
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGGXVXPVEPXGXAG 804
GG GGGG GG GG G GG G V P G G
Sbjct: 161 GGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGG 214
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 962 GXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
G GGGG GG GG G GGG GG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGG 165
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGGXVXPVEPXGXAG 804
G GGGG GG GG G GGG GG G G
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGG GG GG G GGG GG
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG GG G GGG GG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG 123
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -3
Query: 965 GGXG-GGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG G GGG GG GG G GGG GG
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGG 102
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG GG G GGG GG
Sbjct: 117 GGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGG 158
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG GG G GGG GG
Sbjct: 181 GGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGG 222
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGG GG GG G GGG GG
Sbjct: 80 GGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGG 121
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPP 892
G P PP P +PL PR G PPP
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPP 792
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPP 892
G P PP P +PL PR G PPP
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPP 792
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 25.8 bits (54), Expect(2) = 1.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 937 PPXPPPPXPP 966
PP PPPP PP
Sbjct: 137 PPSPPPPPPP 146
Score = 23.8 bits (49), Expect(2) = 1.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 940 PXPPPPXPPXXL 975
P PPPP PP L
Sbjct: 140 PPPPPPPPPPQL 151
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 27.1 bits (57), Expect(2) = 1.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 904 SXPPXXXXXXXPPXPPPPXP 963
S PP PP PPPP P
Sbjct: 780 SAPPSPLTAPIPPPPPPPPP 799
Score = 22.2 bits (45), Expect(2) = 1.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 937 PPXPPPPXPP 966
PP PPP PP
Sbjct: 794 PPPPPPMLPP 803
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 27.1 bits (57), Expect(2) = 1.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 904 SXPPXXXXXXXPPXPPPPXP 963
S PP PP PPPP P
Sbjct: 679 SAPPSPLTAPIPPPPPPPPP 698
Score = 22.2 bits (45), Expect(2) = 1.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 937 PPXPPPPXPP 966
PP PPP PP
Sbjct: 693 PPPPPPMLPP 702
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 803 SPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXPXXXXLXPP 958
SP P P P P PR P PP P P P PP
Sbjct: 137 SPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG GG GGG GG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG G G GGG GG
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGG 94
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.8 bits (54), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 937 PPXPPPPXPP 966
PP PPPP PP
Sbjct: 576 PPPPPPPPPP 585
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 910 PPXXXXXXXPPXPPPPXP 963
PP P PPPP P
Sbjct: 541 PPPVGMANGGPPPPPPLP 558
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = -3
Query: 962 GXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGG--XGGXVXPVEPXGXAG 804
G GGGG GG GG G GGG GG P P G
Sbjct: 66 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG G G GGG GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 172
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGG GG GG G GGG GG
Sbjct: 135 GGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 176
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG GG G G GGG GG
Sbjct: 139 GGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 180
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGG GG GG G GGG GG
Sbjct: 143 GGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG G GG G GGG GG
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXP 934
G P P AP +P P P P PPP P P P
Sbjct: 119 GKPGRPGAPGQPGVPGKPPTAP-CEPTTPPPCKPCPQGPPGPPGP 162
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 886 PXXXXXSXPPXXXXXXXPPXPPPPXPP 966
P + PP PP PPPP PP
Sbjct: 34 PAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXG 843
GG GGGG GG GG G GGG G
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGG 253
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXP 934
G P P AP +P P P P PPP P P P
Sbjct: 119 GKPGRPGAPGQPGVPGKPPTAP-CEPTTPPPCKPCPQGPPGPPGP 162
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXP 934
G P P AP P P+ P P PPP P P P
Sbjct: 117 GKPGRPGAPGTPGTPGKPPVAP-CEPTTPPPCKPCPQGPPGPPGP 160
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXP 934
G P P AP P P+ P P PPP P P P
Sbjct: 112 GKPGRPGAPGTPGTPGKPPVAP-CEPTTPPPCKPCPQGPPGPPGP 155
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 803 SPXXPXAP-PAXXIPXPLPLTPRXXPGXPPPXXXXP 907
+P P AP P +P P P + P PPP P
Sbjct: 109 APAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPP 144
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 800 GSPXXPXAPPAXXIPXPLPLTPRXXPGXPPPXXXXPXXXPXXXXP 934
G P P AP P P+ P P PPP P P P
Sbjct: 112 GKPGRPGAPGTPGTPGKPPVAP-CEPTTPPPCKPCPQGPPGPPGP 155
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 910 PPXXXXXXXPPXPPPPXPP 966
PP PP PPPP PP
Sbjct: 349 PPIISPPAPPPPPPPPPPP 367
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 910 PPXXXXXXXPPXPPPPXPP 966
PP PP PPPP PP
Sbjct: 503 PPIATPSSVPPPPPPPPPP 521
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 940 PXPPPPXPPXXL 975
P PPPP PP L
Sbjct: 630 PPPPPPPPPMGL 641
Score = 23.0 bits (47), Expect(2) = 7.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 937 PPXPPPPXP 963
PP PPPP P
Sbjct: 609 PPPPPPPPP 617
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 23.8 bits (49), Expect(2) = 7.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 940 PXPPPPXPPXXL 975
P PPPP PP L
Sbjct: 456 PPPPPPPPPMGL 467
Score = 23.0 bits (47), Expect(2) = 7.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 937 PPXPPPPXP 963
PP PPPP P
Sbjct: 435 PPPPPPPPP 443
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGG GG GG G GGG GG
Sbjct: 92 GGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGG 133
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 965 GGXGGGGXGGXXXXXXXGGXXXXXXXGXXXXXXEXXGGGXGG 840
GG GGGG G GG G GGG GG
Sbjct: 93 GGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGG 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,526,820
Number of Sequences: 27780
Number of extensions: 238042
Number of successful extensions: 2145
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2594635024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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