Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K03
         (1105 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q42421 Cluster: Chitinase; n=1; Beta vulgaris subsp. vu...    35   4.3  
UniRef50_A0ADW6 Cluster: Putative secreted proline-rich protein;...    34   7.5  
UniRef50_P14918 Cluster: Extensin precursor; n=15; Eukaryota|Rep...    34   7.5  

>UniRef50_Q42421 Cluster: Chitinase; n=1; Beta vulgaris subsp.
           vulgaris|Rep: Chitinase - Beta vulgaris subsp. vulgaris
          Length = 439

 Score = 34.7 bits (76), Expect = 4.3
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = +3

Query: 561 PXPPRPXSPXRXXGXPKAXHPNXKTLAPTXTPXPXPPXXRTXXXXXP 701
           P PPRP +P      P+   P   T  P   P P PP  R      P
Sbjct: 71  PPPPRPPTPRPPPPTPRPPPPRPPTPRPPPPPTPRPPPPRPPTPRPP 117


>UniRef50_A0ADW6 Cluster: Putative secreted proline-rich protein;
           n=1; Streptomyces ambofaciens ATCC 23877|Rep: Putative
           secreted proline-rich protein - Streptomyces ambofaciens
           ATCC 23877
          Length = 193

 Score = 33.9 bits (74), Expect = 7.5
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 561 PXPPRPXSPXRXXGXPKAXHPNXKTLAPTXTPXPXP 668
           P PP P  P R    PK   P   T  PT +P P P
Sbjct: 93  PPPPAPEPPPRKPPAPKPEAPPAPTPTPTPSPTPAP 128


>UniRef50_P14918 Cluster: Extensin precursor; n=15; Eukaryota|Rep:
           Extensin precursor - Zea mays (Maize)
          Length = 267

 Score = 33.9 bits (74), Expect = 7.5
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +3

Query: 561 PXPPRPXSPXRXXGXPKAXHPNXKTLAPTXTPXPXPP 671
           P  P+P  P          HP  K   PT TP P PP
Sbjct: 154 PPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSPKPP 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,578,739
Number of Sequences: 1657284
Number of extensions: 4502265
Number of successful extensions: 13118
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12717
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 107747421395
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)