Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_K03
         (1105 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    30   6.5  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    30   6.5  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   8.6  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   8.6  

>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +3

Query: 561 PXPPRPXSPXRXXGXPKAXHPNXKTLA-PTXTPXPXPP 671
           P PP P  P      P + HP+   +  P   P P PP
Sbjct: 158 PPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPLPP 195


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +3

Query: 561 PXPPRPXSPXRXXGXPKAXHPNXKTLA-PTXTPXPXPP 671
           P PP P  P      P + HP+   +  P   P P PP
Sbjct: 160 PPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPLPP 197


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 16/55 (29%), Positives = 18/55 (32%)
 Frame = +3

Query: 546 GELXXPXPPRPXSPXRXXGXPKAXHPNXKTLAPTXTPXPXPPXXRTXXXXXPXLT 710
           G    P PP P +P      P+   P      PT  P P  P   T     P  T
Sbjct: 341 GPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPPPPT 395


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 16/55 (29%), Positives = 18/55 (32%)
 Frame = +3

Query: 546 GELXXPXPPRPXSPXRXXGXPKAXHPNXKTLAPTXTPXPXPPXXRTXXXXXPXLT 710
           G    P PP P +P      P+   P      PT  P P  P   T     P  T
Sbjct: 341 GPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPPPPT 395


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,093,373
Number of Sequences: 53049
Number of extensions: 268461
Number of successful extensions: 623
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5739749274
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)