Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J24
         (981 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.68 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   2.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   4.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   4.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   8.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +3

Query: 402 GMVHRICFTTCLIFCVITIYYMN 470
           G++  + FT+  IF V++I+YM+
Sbjct: 234 GLILLLMFTSHFIFIVVSIFYMS 256


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +2

Query: 269 LSWFINVHVLCNCCW*PRDNSVW*SIPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLR 448
           L  FI   VLC  C  P          +  T+ STI      C +H P +  H +  F+ 
Sbjct: 3   LDGFIRKFVLCPECENPETEL------LVSTKRSTISQGCKACGYHSPLESNHKLVTFIL 56

Query: 449 DN 454
            N
Sbjct: 57  KN 58


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 117 HKLLQIKYGKMA-VNSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIF 263
           +K   + Y K+  V +   FV+  ILT++ F       P  ++   TI F
Sbjct: 27  YKNSNVNYSKIGIVQTVAYFVIFIILTIVFFEKRSALSPFELIQIRTINF 76


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = -3

Query: 202 IKRVNIDDSTKDVALFTAILPYFIWSNLCQLVFL 101
           I + N+     DV +F  +  + +W  +   +FL
Sbjct: 138 IIKKNVTQQNSDVFIFDNVWLFILWVGILSTIFL 171


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +2

Query: 239 TVSYDYNIRRLSWFINVHVLCNCCW*PRDNSV----W*SIPIEITRSSTIDG 382
           T S   N  R S F N     N C+ PR+NS+    +   P E  RS+ IDG
Sbjct: 381 TFSTTANSCRSSTFRNNRDEYNVCFRPRNNSILIKNFNDSP-ESNRSNEIDG 431


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 242 VSYDYNIRRLSWFINVHVL 298
           + Y  N RR+S F+N+ +L
Sbjct: 113 LGYSINYRRISIFVNLAIL 131


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 344 IPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLRDNHLL 463
           + + IT    I GNI    W+ P++    +P+ +   H+L
Sbjct: 139 LAMTITGPLVIIGNIAMELWNMPRENIEPLPNVILACHML 178


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 465 MNKLSQKKYAVVAPQPAAVKSRRHK 539
           M  ++ KK+  + P P+ +K+ R K
Sbjct: 614 MGYMAAKKHLEINPDPSILKNLRQK 638


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,403
Number of Sequences: 336
Number of extensions: 4105
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27823477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)