Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J24
(981 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.009
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.14
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.19
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.76
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 2.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 4.0
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 26 7.1
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 26 7.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 9.3
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 9.3
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 856 PPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXPPXXXXPXXXP 981
PP P S +P + P P PPPP PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 832 PXPTXXPXPPXXPPSXSPXPXAXXXPXXPXXXXPPP 939
P P PP P S P P A P P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 794 PXXPXXXXPXPXXPAXXPFPPXXXXPXLFPPPPAXGXXPXPPXXXXXPPPP 946
P P P P A P PP P PPPP+ P P PPPP
Sbjct: 1691 PVRPQSAAP-PQMSAPTPPPP----PMSVPPPPS--APPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 832 PXPTXXPXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXPP 954
P P P PP P P P P PPPP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGP-PPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Frame = +2
Query: 794 PXXPXXXXPXPXXPAXXPFPP----XXXXPXLFPPPPAXGXXPXPPXXXXXPPPP 946
P P P P PA P PP P PPP G P PP PPPP
Sbjct: 734 PPPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP----PPPPP 783
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +1
Query: 823 PXXPXPTXXPXP-PXXPPS-XSPXPXAXXXPXXPXXXXPPPPXXPP 954
P PT P P P PP+ P P PPPP PP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +2
Query: 818 PXPXXPAXXPFPPXXXXPXLFPPPPAXGXXPXPP----XXXXXPPPP 946
P P PA P + PP P G P PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +1
Query: 850 PXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXP 951
P P P+ +P P P PPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/86 (24%), Positives = 23/86 (26%), Gaps = 3/86 (3%)
Frame = +1
Query: 733 PXGXPP---PXXXPDXXLXFXXXXGXPXXXXXXPXXPXPTXXPXPPXXPPSXSPXPXAXX 903
P G PP P P P P P P+ P P + P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 904 XPXXPXXXXPPPPXXPPXXXXPXXXP 981
P P PP P P P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = +2
Query: 794 PXXPXXXXPXPXXPAXXPFPPXXXXPXLFPPPPA--XGXXPXPPXXXXXPPPP 946
P P P PA PP PP PA G P P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/83 (25%), Positives = 26/83 (31%), Gaps = 2/83 (2%)
Frame = +2
Query: 704 PPPXXQXPXX-PXGXPPLXXXRTXXSFXRQXPXXPXXXXPXPXXPAXXPFPPXXXXPXLF 880
P P P P PP+ ++ P P P PA PP +
Sbjct: 1035 PVPSTAPPVPIPTSTPPVP--KSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 881 P-PPPAXGXXPXPPXXXXXPPPP 946
P P P+ P P PP P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Frame = +2
Query: 794 PXXPXXXXPXPXXPAXXPFPPXXXXPXLFPPPPAX-GXXPXPPXXXXXPPPP 946
P P P P PP PP PA G P P PP P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = +1
Query: 802 PXXXXXXPXXPXPTXXPXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXPPXXXXP 969
P P P P+ P P + P P P P PP P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/88 (21%), Positives = 20/88 (22%)
Frame = +1
Query: 706 PPXXTTPXXPXGXPPPXXXPDXXLXFXXXXGXPXXXXXXPXXPXPTXXPXPPXXPPSXSP 885
PP P P P P P P P+ P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 886 XPXAXXXPXXPXXXXPPPPXXPPXXXXP 969
P P P PP P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/61 (26%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Frame = +1
Query: 802 PXXXXXXPXXPXPTXX-PXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXPPXXXXPXXX 978
P P P P+ P P P P P P PP PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 979 P 981
P
Sbjct: 1222 P 1222
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +2
Query: 794 PXXPXXXXPXPXXPAXX--PFPPXXXXPXLFPPPPAXGXXPXPPXXXXXPPPP 946
P P P P+ P PP P + P P+ G P P PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPV--PTPSAGLPPVPVPTAKAPPVP 1240
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/51 (25%), Positives = 15/51 (29%)
Frame = +1
Query: 802 PXXXXXXPXXPXPTXXPXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXPP 954
P P P P+ P P + P P P P P PP
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.76
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = +2
Query: 881 PPPP---AXGXXPXPPXXXXXPPPP 946
PPPP A G P PP PPPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Frame = +2
Query: 704 PPPXXQXPXXPXGXPPLXXXRTXXSFXRQXPXXPXXXXP--XPXXPAXXPFPPXXXXPXL 877
PPP P PPL R + P P P P A P P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 878 FPP--PPAXGXXPXPPXXXXXPPPP 946
PP PP+ P P P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAP 447
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 832 PXPTXXPXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXPPXXXXPXXXP 981
P PT PP PPS P P P PP P P P
Sbjct: 416 PVPTPPSLPPSAPPSL-PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 27.5 bits (58), Expect = 3.1
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +2
Query: 704 PPPXXQXPXXPXGXPPLXXXRTXXSFXRQXPXXPXXXXPXPXXPAXXPFPPXXXXPXLFP 883
P P P P PP P P P PA P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI-APPLPAGMPAAP-PLPPAAPA 475
Query: 884 PPPAXGXXPXPP 919
PPPA P P
Sbjct: 476 PPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 5.3
Identities = 23/98 (23%), Positives = 26/98 (26%), Gaps = 6/98 (6%)
Frame = +1
Query: 706 PPXXTTPXXPXGXPPPXXXPDXXLXFXXXXGXPXXXXXXPXXPXPTXXP-XPPXXPPSXS 882
PP ++ PP P G P P+ P PP PPS
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Query: 883 P-----XPXAXXXPXXPXXXXPPPPXXPPXXXXPXXXP 981
P P A P P P P P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/59 (27%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Frame = +1
Query: 709 PXXTTPXXPXGXPP-PXXXPDXXLXFXXXXGXPXXXXXXPXXPXPTXXPXPPXXPPSXS 882
P P P G P P P + G P P P P P P P S
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVAS 490
Score = 25.8 bits (54), Expect = 9.3
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = +1
Query: 709 PXXTTPXXPXGXPPPXXXPDXXLXFXXXXGXPXXXXXXPXXPXPTXXPXPPXXPPSXSPX 888
P P PPP P P P PP PPS S
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS-SRV 299
Query: 889 PXAXXXPXXPXXXXPPPP 942
A PPPP
Sbjct: 300 SAAALAANKKRPPPPPPP 317
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/60 (25%), Positives = 16/60 (26%)
Frame = +1
Query: 802 PXXXXXXPXXPXPTXXPXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXPPXXXXPXXXP 981
P P P+ P PP P A P P PP P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 868 PPSXSPXPXAXXXPXXPXXXXPPPPXXPP 954
PPS P A P PPPP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Frame = +1
Query: 841 TXXPXPPXX-PPSXSPXPXAXXXPXXPXXXXPPPPXXPPXXXXPXXXP 981
T P PP P P P P P PP PP P P
Sbjct: 489 TSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMP 536
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +2
Query: 803 PXXXXPXPXXPAXXPFPPXXXXPXLFPPPPAXGXXPXPPXXXXXPPPP 946
P P P+ P P P PP PP PPPP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +1
Query: 802 PXXXXXXPXXPXPTXXPXPPXXPPSXSPXPXAXXXPXXPXXXXPPPPXXP 951
P P P P+ PP P P P + P P PP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPI-PSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +1
Query: 823 PXXPXPTXXPXPPXX-PPSXS-PXPXAXXXPXXPXXXXPPPPXXPP 954
P P P PP PP S P P P P P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 144 KMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLG--SLMFMFFVTAV 311
+M +NS + S LT+ + +G+ Y LS +I GYL S+ F+ V +V
Sbjct: 323 QMRINSPSHVQRLSFLTIAMQAGLDAYIAIFFLSTNAVIEKGYLPFVSVAFLSLVPSV 380
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 LGSLMFMFFVTAVGNLETILFGKAFQLKLPEVVL-SMGISLIAAGMVHRICFTTCLIF 443
L L F F V + ++L G + LP ++L ++ I +AA + FTTCLI+
Sbjct: 131 LTGLCFATFSYEVSPVVSVLSG-VLLISLPTLILLNLCILKLAAKLHLSALFTTCLIY 187
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 355 FNWNALPNRIVSRLPTAVTK 296
FNW++L + ++ R+P A TK
Sbjct: 11 FNWSSLSSILLPRIPLATTK 30
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 824 PXXPAXXPFPPXXXXPXLFPPPPAXG 901
P P P PP P PPPP G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 881 PPPPAXGXXPXPPXXXXXPPPP 946
PPPP G P P PPPP
Sbjct: 11 PPPPPPGFEP--PSQPPPPPPP 30
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -3
Query: 187 IDDSTKDVALFTAILPYFIWSNLCQLVFLLSLT*MTGLFRLMILSLTQN 41
+D++T + ++ P+ +SN+ ++ T +G+ LS TQN
Sbjct: 488 VDNNTPPLLVYFPNYPWVYYSNISTFTMSMNDTLSSGILENAALSATQN 536
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,989,252
Number of Sequences: 5004
Number of extensions: 59363
Number of successful extensions: 295
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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